Gene Pden_1672 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_1672 
Symbol 
ID4579826 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp1653521 
End bp1654327 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content66% 
IMG OID639768986 
Productmyo-inositol catabolism IolB domain-containing protein 
Protein accessionYP_915465 
Protein GI119384409 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3718] Uncharacterized enzyme involved in inositol metabolism 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACTCT TGCGCAAACC GGCCGGCCGG CACGGCCTTG TCCATCACGT CACCCCCGAG 
GATGCGGGCT GGTCCCATGT CGGCTTCGAC CTCTGGCGAC TGGAACCAGG CGAAGTGGCC
GAGGGGCATA CCGGCGGCAA CGAGGCGATC CTGGTCATCG TCGAGGGCAA GGCCCGCATC
GCCGGTGCCG GGCAGGATTG GGGCGAGATG GGCGGGCGGA CGGACGTGTT CGAAAAGACG
CCGCCGCATT GCCTCTATCT GCCCGATGGC AGCGACTGGC GGGCCGAGGC CGCGACGCCG
CTGACCCTGG CCGTCTGCCT CGCCCCCGGC AAGGGCGGCC ATCCCGCGCG CCGCATCGGC
CCCCAGGGCA TCAGCCTGAC CCAGCGCGGG CAGGGCGCCA ACACTCGCTT CATCAACAAC
ATCGCCATGG AGAACGACGA TTACTGCGAC AGCCTGCTGG TTACCGAGGT CTTCACGCCG
GACGGAAACT GGTCGAGCTA TCCGCCGCAT CGCCATGATG AGGATGACTT TCCCCGCATG
ACCCACCTGG AGGAGACCTA TTACCACAGG CTCAATCCGG CGCAGGGCTA CGGCATCCAG
CGGGTCTTTA CCGACGACGG CAGCCTCGAT GAGACCATGG CGGTGCAGAA CCACGATGTC
GTGCTGGTGC CGCGCGGCCA TCATCCCTGC GGCGTGCCCT ATGGCTACGA GATGTATTAC
CTGAACGTCA TGGCCGGGCC GATCCGCAAA TGGCGCTATG AGAATCATCC CGACCACGAC
TGGATCTGGC AGCGCGACAA CCCTTGA
 
Protein sequence
MKLLRKPAGR HGLVHHVTPE DAGWSHVGFD LWRLEPGEVA EGHTGGNEAI LVIVEGKARI 
AGAGQDWGEM GGRTDVFEKT PPHCLYLPDG SDWRAEAATP LTLAVCLAPG KGGHPARRIG
PQGISLTQRG QGANTRFINN IAMENDDYCD SLLVTEVFTP DGNWSSYPPH RHDEDDFPRM
THLEETYYHR LNPAQGYGIQ RVFTDDGSLD ETMAVQNHDV VLVPRGHHPC GVPYGYEMYY
LNVMAGPIRK WRYENHPDHD WIWQRDNP