| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_1671 |
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| Symbol | |
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| ID | 4579825 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | - |
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| Start bp | 1651711 |
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| End bp | 1653327 |
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| Gene Length | 1617 bp |
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| Protein Length | 538 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 639768985 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_915464 |
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| Protein GI | 119384408 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.901467 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGAGGCA TTATGTCGTT CTTCTCCACC CGCATGCTCG CGGCGTCGGC CTTTGCGCTG
ATGGCTGCGG CACCGCTGCA TGCCAAGACA TTCGTCTATT GCTCGGAAGG TTCGCCCGAG
GGCTTCGACG CGGCGCCCTA TACATCGGGC ACCACCTTCG ATGCCTCTGG CCACGCGGTC
TACAACCGCC TGGTGCAGTT CAAGCCCGGC ACCACCGAGA TCGAGCCCGC GCTGGCCGAA
AGCTGGGACG TGTCCGAGGA TGGACTGGAA TACACCTTCC ACCTGCGCCA GGGCGTGAAG
TTCCACTCCA ACGACAAGTT CACGCCCTCG CGCGATTTCA ACGCCGACGA CGTGATCTTC
ACCTTCGAGC GCCAGGCCAG CGCCGACCAT CCCTGGCACG AATACATCCC CGGCATCACC
TACGAGTATT ACTCGTCGAT GGAGATGGAC AAGCTGATCA AGTCCATCGA AAAGGTCGAC
GACCACACGG TCAAGTTCAC CCTGAGCCAG CCCGAGGCGC CCTTCCTCGC CAATGTGGCG
ATGCCCTTCG TCTCGATCGT CTCCAAGGAA TATGCCGATA CGCTGGAAAC CGCCGGCACC
CGCGAGGATC TGAACAACGC GCCGATCGGC ACCGGCCCCT TCCGCTTCGT CGCCTATCAG
AAGGACGCGG TGATCCGTTA CCAGAAGAAC GCCGATTACT GGGGCGAGGC GCCCAAGGTC
GACGACCTGG TCTTTGCCAT CACCCCCGAC GCATCGGTGC GGCTGCAAAA GCTCAAGGCC
GGCGAATGCC ACCTGATGCC CTATCCCGCG CCCGCCGACC TGGACGAGAT CCGGGCCGAT
CCGAACCTCA AGCTGGACGA GCAGCCCGGC CTGAACGTGG GCTATCTGGC CTATAACACC
ACCGTCGCGC CCTTCGACAA TCCGCAGGTC CGCAAGGCGC TGAACATGGC GCTGGACAAG
CCGGCGCTGA TCGAGGCCGT CTATCAGGGC AATGCCGAGG TCGCCAAGAA CCCGATCCCG
CCGACCATGT GGTCCTATAA CGACGCCATC GAGGACGACA AATACGACCC CGAGGCGGCC
AAGGCGATGC TCGAGGAAGC CGGCGTCAAG GACCTGACCA TGGAAGTCTG GGCCATGCCG
GTGCAGCGCC CCTACATGCC CAACGCCCGC CGCACGGCCG AGATGATCCA GAGCGACTTC
GCCAAGATCG GCGTCAAGGT CGAGATCGTC AGCTACGAAT GGGGCGAATA CCTGAAGAAG
TCGATGGAAG AGGGCCGCAA GGGCGCCGTC ATCCTGGGCT GGACCGGCGA CAACGGCGAC
CCCGACAACT TCCTGTCGGT GCTGCTCAGC TGCGCGTCGG CCAATCCGGG CGGCGCGAAC
CGCGCCTTCT GGTGCAACGA GGCGTTCTCG GACCTGCTGG CCAAGGCCAA GGCGAGTTCG
GACCACGACG AGCGCGTGAA GCTTTACGAA GAGGCGCAGG TCATCTTCAA GCAAGAGGCG
CCCTGGGCCA CGCTGGCACA TTCGACGCAA TACGTGCCGA TGGCCAAGAA CGTGACCGGC
TTTGTGCAAT CGCCGCTGGG CGACTATGCC TTCGACACCG TGGACCTGAC CGAATAA
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| Protein sequence | MGGIMSFFST RMLAASAFAL MAAAPLHAKT FVYCSEGSPE GFDAAPYTSG TTFDASGHAV
YNRLVQFKPG TTEIEPALAE SWDVSEDGLE YTFHLRQGVK FHSNDKFTPS RDFNADDVIF
TFERQASADH PWHEYIPGIT YEYYSSMEMD KLIKSIEKVD DHTVKFTLSQ PEAPFLANVA
MPFVSIVSKE YADTLETAGT REDLNNAPIG TGPFRFVAYQ KDAVIRYQKN ADYWGEAPKV
DDLVFAITPD ASVRLQKLKA GECHLMPYPA PADLDEIRAD PNLKLDEQPG LNVGYLAYNT
TVAPFDNPQV RKALNMALDK PALIEAVYQG NAEVAKNPIP PTMWSYNDAI EDDKYDPEAA
KAMLEEAGVK DLTMEVWAMP VQRPYMPNAR RTAEMIQSDF AKIGVKVEIV SYEWGEYLKK
SMEEGRKGAV ILGWTGDNGD PDNFLSVLLS CASANPGGAN RAFWCNEAFS DLLAKAKASS
DHDERVKLYE EAQVIFKQEA PWATLAHSTQ YVPMAKNVTG FVQSPLGDYA FDTVDLTE
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