Gene Pden_1635 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_1635 
Symbol 
ID4581015 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp1616616 
End bp1617704 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content68% 
IMG OID639768950 
Productsignal transduction histidine kinase 
Protein accessionYP_915429 
Protein GI119384373 
COG category[T] Signal transduction mechanisms 
COG ID[COG3920] Signal transduction histidine kinase 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.466466 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGGGT CGGTGCATTT CCTGGATGGC GGCGGCGAAA TGGGCAGGGC CATTCGCGAA 
CGTGACTGGT CCGCCAATCC GCTGGGTCCG CCCGACGGCT GGCCCTCGGC GCTCAAGATC
GCGCTGGGAA TGGCACTGAA CTCGAAATTC CCCAAATGCA TCGTCTGGGG GCCGGAACTG
GTCACGCTGC ACAACGACGC CTTCCGCCCG ATCCTGGGCG ACAAGGGCGA CGTGCTCGGC
CGGTCCTTCG CCGATGTCTG GAGCGAGGCC TGGGCCGAGA TCGGCCCCAT CGCCGAGCGC
GCCTATGCCG GCGAGGCGAC CTTCATCGAG GATTTCCGGT TGGTCATCGA CCGCTACGGC
TATCCCGAGG AATGCCATTT CACCTTTTGC TACAGCCCGA TCCGCGACGA GAACGGCGTG
GTGCGCGGCA TGATCGACAC GGTGATCGAG ACCACCGGCA AGGTCGAGGC CAGCCGGCAA
CTGCGCCTTG TGAACGGCGA ACTCGGCCAC CGGATCAAGA ACACGCTGAC CGTGGTTTCG
GCCATCGTCA ACCAGACCCT GCACAGCCAT TCCGGCAAGG ATGCGCGCGA AGTCTTGCGC
CAGCGCATCG GCGCGCTGGC GCAGGCGCAA TCGCTGCTGA CCGATTCCGG TGCGCTGGAT
GCCGAGACGA GGCAGGTGGT GGCGCAGGCG CTGGCGCCGT TTCGCACTGG GCAGCGGCGC
TTTCGCATCG CCGGCCCGCC GGTCAAGCTG TCCGCGAGAC AGGCGCTGAC CCTGGCGCTT
GCCATCAACG AACTGGCGAC CAATGCGCTG AAATACGGCG CGCTCTCGGT GCCCACCGGG
GTCGTCGATC TGAGCTGGAG CGGCGGGCGA CCCGGCAGCG ACGACCCGTT CCGGCTGCTC
TGGGCGGAAT CCGGCGGGCC GCCCGTCGCC GCCTCTGCCG GCAAGGGCTT CGGCTCGCTC
ATCATCGAGC ATGTGCTGGC GCAGGATTTC ATGGGCGAAA GCGCGATCTC GCACGATCCC
GCCGGGCTGC GCTGCGAATT GCGCACGCGG ATGCGCCATC TGGGCGCAGG CCACGGCGCG
CCGGGCTGA
 
Protein sequence
MAGSVHFLDG GGEMGRAIRE RDWSANPLGP PDGWPSALKI ALGMALNSKF PKCIVWGPEL 
VTLHNDAFRP ILGDKGDVLG RSFADVWSEA WAEIGPIAER AYAGEATFIE DFRLVIDRYG
YPEECHFTFC YSPIRDENGV VRGMIDTVIE TTGKVEASRQ LRLVNGELGH RIKNTLTVVS
AIVNQTLHSH SGKDAREVLR QRIGALAQAQ SLLTDSGALD AETRQVVAQA LAPFRTGQRR
FRIAGPPVKL SARQALTLAL AINELATNAL KYGALSVPTG VVDLSWSGGR PGSDDPFRLL
WAESGGPPVA ASAGKGFGSL IIEHVLAQDF MGESAISHDP AGLRCELRTR MRHLGAGHGA
PG