Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_1596 |
Symbol | |
ID | 4580203 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008686 |
Strand | + |
Start bp | 1575380 |
End bp | 1576246 |
Gene Length | 867 bp |
Protein Length | 288 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639768913 |
Product | ABC-3 protein |
Protein accession | YP_915392 |
Protein GI | 119384336 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1108] ABC-type Mn2+/Zn2+ transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0434418 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTCGACG GGGTCGTGGC GCCCTTCATG GAATTCGCCT TCATGCAGCG GGCGCTGGCG GGGGCGCTGC TGCTGTCGCT CTCGGCCTGC CCGGTCGGGG TCTTCCTGAT GCTGCGCCGG ATGAGCCTGA CCGGGGACGC CATGTCCCAT GCCATCCTGC CGGGCGCGGC GGCGGGCTTC ATGCTTTACG GGCTGGAGAT TGTGCCGATG ACCATCGGCG GGCTGATCGC GGGCGCCATC GTGGCGCTTG GCGCCGGCGC CGTGGCACGG CTGACGGTGC AGAAGGAGGA CGCCTCGATG GCGGCTTTCT ACCTGGTTTC GCTGGCCATC GGGGTCGTCA TGGTCAGCCT GCGCGGCTCC AGCGTCGATC TGATGCATGT TCTGTTCGGC ACGGTGCTGG CGCTGAACGA CGATGCGCTG TGGCTGATCG GGCTTGTCGC CTCGGTCACG CTGGCGACCA CGGTGCTGCT GTGGCGCGCG CTGGTGGCGG AGTGCCTCGA CCCGCTGTTC CTGCGCTCGG TCTCGCGCCT CGGCGGGGCG GTGCATTTCG CCTTTCTGGG GCTGGTGGTG CTGAACCTCG TCGCGGGGTT TCAGGCGCTC GGCACGCTGC TGTCGGTGGG GCTGATGATC CTGCCCGGTG CTGCGGCGCG GTTCTGGGTG AACGATGTCC TGGCGATGTG TGTCGTCTCG GTCGGGATCG GCATCGTCTC CTCGCTGGGC GGGCTCTTGC TGTCCTATCA CGCCAGCCTC CCCTCGGGAC CGGCGATCAT CCTCTCGGCC GGGGTGGTCT ATCTCGTCTC GCTTCTGGCG GGGCCGCGCG GCGTGCTGCG GCCCGCCCTG CCCCGCCGCC ATCATCGGAC GGCCTGA
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Protein sequence | MVDGVVAPFM EFAFMQRALA GALLLSLSAC PVGVFLMLRR MSLTGDAMSH AILPGAAAGF MLYGLEIVPM TIGGLIAGAI VALGAGAVAR LTVQKEDASM AAFYLVSLAI GVVMVSLRGS SVDLMHVLFG TVLALNDDAL WLIGLVASVT LATTVLLWRA LVAECLDPLF LRSVSRLGGA VHFAFLGLVV LNLVAGFQAL GTLLSVGLMI LPGAAARFWV NDVLAMCVVS VGIGIVSSLG GLLLSYHASL PSGPAIILSA GVVYLVSLLA GPRGVLRPAL PRRHHRTA
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