| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_1562 |
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| Symbol | nrdR |
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| ID | 4580864 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | - |
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| Start bp | 1535665 |
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| End bp | 1536129 |
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| Gene Length | 465 bp |
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| Protein Length | 154 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639768878 |
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| Product | transcriptional regulator NrdR |
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| Protein accession | YP_915358 |
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| Protein GI | 119384302 |
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| COG category | [K] Transcription |
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| COG ID | [COG1327] Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains |
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| TIGRFAM ID | [TIGR00244] transcriptional regulator NrdR |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.000599658 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0421133 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGCTGTC CTTTCTGTGG AAATGTCGAT ACGCAGGTCA AGGATTCGCG TCCGGCCGAA
GACAACGTGG CCATCCGCCG CCGCCGCTTC TGCCCGGCCT GCGGCGGTCG TTTCACCACC
TATGAACGCG TGCAGCTGCG CGATCTGGTC GTGGTCAAGT CCAGCGGCCG GCGCGAGGAT
TTCGACCGCA CCAAGCTGGA GCGCTCGATC CGCATCGCCA TGCAGAAACG CCCCATCGAG
CCCGAGCGCA TCGACCAGAT GATCTCGGGC ATCGTGCGCC GGCTGGAAAG CATGGGCGAC
ACCGACATCC CCTCGAAGGT CATCGGCGAG ATCGTGATGG AGACGCTGGC CCGGATCGAT
ACCGTGGCCT ATGTGCGTTT CGCCAGCGTC TACAAGAACT TCCAGGCGGC GGACGATTTC
GACAAGTTCG TCTCGGAGCT GCGCCCGGGC CTGGTCGAGG AGTGA
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| Protein sequence | MRCPFCGNVD TQVKDSRPAE DNVAIRRRRF CPACGGRFTT YERVQLRDLV VVKSSGRRED
FDRTKLERSI RIAMQKRPIE PERIDQMISG IVRRLESMGD TDIPSKVIGE IVMETLARID
TVAYVRFASV YKNFQAADDF DKFVSELRPG LVEE
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