Gene Pden_1544 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_1544 
Symbol 
ID4581291 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp1518953 
End bp1519915 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content66% 
IMG OID639768859 
Producthypothetical protein 
Protein accessionYP_915340 
Protein GI119384284 
COG category[L] Replication, recombination and repair 
COG ID[COG4227] Antirestriction protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0398449 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAGAG AACATCGCGC GGCCCGCAAG AGCGGCCCGC GTACCAACCT TTATGACGAC 
ATCACCGACA AGATCATCGC CGAGCTGGAG GGAGGCCGGC TGCCCTGGGT CCAGCCCTGG
GGGACTGCGG CGGTGCAGGC GCCGCTCGCC ATGCCGCGCA ACGCCAGCAC GGGTCGGCAA
TACTCCGGGA TCAATGTCCT GATCCTCTGG GGCGCCGTCA TCCAGCAGGG CTATCCAACC
CAGCACTGGC TGACCTTCCG CCAGGCGCTC TCGCTTGGCG GCAATGTCCG CAAGGGCGAG
CGCGGCACGA CCGTTGTCTA TGCCGACCGA TTCACGCCTG AAGACGAGAA GCGCCGCGCC
CGGGAGACCG GGGAAGACGC AAACAGCATC CCGTTTCTGA AGCGCTTTAC CGTGTTCAAC
GCGGCGCAAT GCGAGGGTCT GCACGACGGC ATCGCCGTCG AGGCACCGCC ACCGCTGCCC
GGGCTGATTG AGCCGCAGGT CGAGGCATTG ATCGCGGCGA CCGGTATCGA CTTCCGGATC
GGCGGCAACC GCGCCTTCTA TGTACCCGCG CTCGACTATG TGCAGGTGCC ACCTCCGCAG
GCCTATTTCG AGCCGATCAA CTGGCACCGC ACGGCGCTGC ACGAGATGGG GCACGCGACA
GGACATGCCT CACGGTTGGG GCGGGACTTC TCGGGGAATT TCGGCACGAG GAAATATGCT
TTCGAGGAAC TGATCGCCGA GATTTCGAGC GCGTTCTGTT GCGCCTCGCT CGGGATTCTC
CCGACGGTGC GCCACGCCGA TTACGTGGGC GCGTGGCTGG AGGTGATGCG CGAGGATTCC
CGCGCCATCG TGCGTGCCGC CTCGCAGGCC AGCAAGGCTG CCGACTGGCT TCTGGCCCAT
CTGCCCGACG ACAGCACCGA TGTTGAGCGG CAGACCCCGA CGGAAGGGAG GGCCGCGGCA
TGA
 
Protein sequence
MTREHRAARK SGPRTNLYDD ITDKIIAELE GGRLPWVQPW GTAAVQAPLA MPRNASTGRQ 
YSGINVLILW GAVIQQGYPT QHWLTFRQAL SLGGNVRKGE RGTTVVYADR FTPEDEKRRA
RETGEDANSI PFLKRFTVFN AAQCEGLHDG IAVEAPPPLP GLIEPQVEAL IAATGIDFRI
GGNRAFYVPA LDYVQVPPPQ AYFEPINWHR TALHEMGHAT GHASRLGRDF SGNFGTRKYA
FEELIAEISS AFCCASLGIL PTVRHADYVG AWLEVMREDS RAIVRAASQA SKAADWLLAH
LPDDSTDVER QTPTEGRAAA