| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_1525 |
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| Symbol | |
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| ID | 4578983 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | - |
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| Start bp | 1485429 |
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| End bp | 1489808 |
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| Gene Length | 4380 bp |
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| Protein Length | 1459 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 639768840 |
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| Product | hypothetical protein |
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| Protein accession | YP_915321 |
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| Protein GI | 119384265 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0847093 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCCGCA AACCAATTAC CGATATGTCC GCGTGGCCGT CGCTGAGCCT CGAAGGCAAC
CTGATCGCGC CTGCAATGAT CGCAAAGATC GATCAGCGCC AGGCACCCGA GCAATCCCCC
GAGGAATACG GGGTTCGCAA AGGCCTACAG ATCCGCGAGG AAATCGCCAC CGCCTTCCGC
GTAGGCCAAT CGCATTTCGA TGCCTTTGCG AAGATCGAAC ACCCCTCGGC CGCCGCCACC
TCGCGTTTCA TCGCCGACTT CTTCAAGGAA ACCTTCGGGT ACACAGACCT CACGGTGGCA
GCGGCACCGA TCGCCCTGAT CGCGTCCGAT CGTGTGCCTG TCGTCGTCGT CCCGCCGTCC
GAGCTACTTG ACCGCCGCAG CCCGACGCTC TCGACGGACA GGTCGCGCTC TCCGGCCTTT
GCCCTTCAGG ACCACCTGAA TGATCGGGAC GAGGCCCTTT GGGGCATAGT CACCAATGGG
ATGCAGTTGC GCCTCATGCG CGACAATGCC TCGCTGACCC GTCCGGCCTA TGTCGAGGCC
GATCTGGCGC AGATGTTTAC CAACGAAGAC ATTGCGTCCT TCGCGGTGCT CTGGCTCATG
ATCCACCGCA CCCGCTTCGG CGCGGCAGAG ACCACCGCCA CCGATTGCCC CATCGAACGC
TGGCGCGATG CCGGCTCCAA GGAGGGCGAA GCCGCGCGAG ATCGCCTGGC CGGTCAGGTC
CAACTGGCCC TCAAACTGCT CGGCTCGGGC TTCCTCGAGG CTAACCCCGA CCTCGCCGCG
AAACTGCGGT CCGGCGAAGT GAACCTGACC GAGTGGTTCA ACGAACTCCT GCGTCTCGTC
TACCGGCTGA TCTTCCTGAT GGTGGCCGAG GACCGGAACC TCCTCCACCC CGAAAAGGCC
AAGCCCGAGG CGCGCGCCCT TTACGCCCAA GGCTATTCGC TCCAGTCGCT GCGCAAGCAA
TGCTACCGCG CCGCCACCTG GGACAAGCAC CATGACCGCT ACGAGGGGGT GAAGATCGTC
TTCCGCGCCC TCACACATGG CCAACCCGCC CTTGCGCTGC CCGCGCTCGG CGGCCTCTTT
GCCGAGGACA GGCTGCCCCA CTTGGAGACC GCCCGCCTGC GCAACCGCGC CTTCATGGAA
GCGCTCTATC GCCTCTCCTG GCTCGCGGAC AAGACCGGCA TGGTCCCCGT CAACTGGCGC
GCGATGGAGA CCGAGGAACT GGGCTCGGTC TACGAATCCC TCCTCGAACT CCAGCCGCAG
CTGTGTGACG ACGGCAAGAC GCTGGTCTTC GCCTCCGAGG CGGCCGAGCA GAAGGGCAAC
CAGCGCAAGA CCACCGGCTC CTACTACACG CCCGACAGTC TCGTGCAGGC GCTGCTCGAC
ACCGCGCTCG ATCCCGTGCT CGACAAGACT GAGGCCGAGG CGGACGATCC CGCCAAGGCG
CTGCTGAAGC TTTCGGTCAT CGACCCCGCC TGCGGCTCGG GTCACTTCCT GCTGGCCGCT
GCCCGCCGCA TCGCAACGCG GCTTGCCCGC ATTCGTGAGG GCGGCACTCC GGGACTCGAA
CACTTCCGCC ATGCGCTGCG CGATGTCGCG CGCTGCTGCA TCCACGGGGT GGACCGCAAC
CCTATGGCGG TGGAGCTGAC CAAAGTCGCG CTGTGGATCG AGACGGTGGA CCCGGGCCTT
CCCCTCGGCT TCTTCGACGC GCAGATCCGC TGCGGCGATG CGCTGCTCGG CGTGTTCGAC
CTGCAGGTGT TGCAGGACGG CATTCCCGAT GCCGCCTACA AGCCGCTCAC CGGCGATGAT
CGAAACACGG CGCGCTACTA CCTTCAAGCG AACCGCGCCG CGACGTCTGG GCAAGGCGGG
TTCGACTTCG GCACCGGTCA GGCGTCGATG CCCGCGATGA AGCCGCTGGC ACTGGATTTC
TCGGGTTTCC GCGACCTGCC CGAGGATACG GTCGAGCAGA TCGGCGCCAA GGCCAAGCGG
TTCAAGGAGC TGCGCAAGGG GCAGACCTTC GTCCGCGCCA AGGCGGCGGC GGACCTCTAT
GTGGCGGCCT TCCTGCTGCC AAAAGTGGGC GGCGCACCGG CGGGAGCGTC GGAGCGGACA
GTACCGACGA CCGAAGAGAT GTGGATGGCC CTCAATCAGG GCAAGATGCG CCAGGCGATG
GTCGAGGCCC CCAAGGCCGC CCGCAACGCC CGCGCCCTGC ATTGGCCGCT GGAGTTCCCT
GATGTGATGC AACGCGGCGG CTTCGACGTG GTGCTGGGAA ATCCGCCTTG GGAAGTCATT
CAGCTATCAG AGAAGGAGTT CTTTGCGTCC GTGGCACCGG AAGTTGCCAC CTTGGCCGGA
GCAAAACGGA AGGCCAAAAT CGCAAAGCTT GAAGAGATCA ATCCCGCCCT CTTCATGTCG
TATGTTCTTG GGAAGCGCGA ATTTGATGCC GCCAATGAAT TTGCTCGCGC ATCAAATCGC
TTTTCCTATT CTGCCGAAGG CAAGCTAAAT ACATACTCTC TGTTTGCCGA GCTCTTTCTT
TCCCTAATGG GGAGCGGTGG AGGCGCTGGC CTGATCGTGC CGACAGGTAT CGCGACCGAT
AAGTTCAATG CAAAGTTCTT CGCTCATATC AGCGGAGAAA AGATGGTGCG CTCGCTGTTT
TCGTTCGAGA ATGAAGAGTT CGTCTTTCCC GCGATTCACC ACTCAATACG GTTTTGCCTA
CTGACGCTAT CCCGCGCTAA TATTGACCGG GCCGAGTTTG CATTTTTCCT AAGAAGGATA
TCGCAGCTCG AAGATCCAAC GCGAGTTTAC CATCTCTCGC CCGAGGAAAT TCAGCTCATC
AACCCGATAA CTTCAACAGC TCCAATTTTC CGAACGAGAG ACGATGCGGA CCTCACCGCT
GCAGTGTATA ATCGATTGCC AGTTCTCGGG GAGGCGCTTA CTTGGGAGAC TTGGCGGGTT
GACCTAATTC AAAATTTCTT CTCGACTTCG AACGCAGCAG ACTCGGAAAT TATAGTTCGC
GCCGAGGACA TGGGGGCAAC AACCGGATTT GTTCCGGTGC TCAGGGGAAC AATGGTTGAC
CAGTTCAATC ACGGCGCCGC TGCGTATGAC CTCACAGCCG ACGAATTCAT CGAAACGACG
CCGCTTGATC TGCCTGAGAG CTGGGCGGAC GTTCGGTCAG ATAAGTACGT TCCCATTGAC
GAACTCGAGA AGAAACTTCG CGCCCTCGAT TGGGAAGATG GATGGTTGGC TGGATGGCGC
GATATCACTA GTGCCCACGT TAACCGTACG GTGATAGCGA GCATTTTCCC CAAAACGGCA
ACAGACGACA CCCTTTCTTT AATGCTCCCG AGAGGTGGAG CTACACACGC AGCCACACTA
GTAGCGAACT TGAATTCTTT GCCTCTCGAC TATGTTGCGC GACAAAAGGT CGGCGGCACG
CATATTCGTA AGTATGTGAT TTCACAGTTT CCCATCCTGC CGCCAGAATT CTACTCTGAA
TTGCGCCTAG ATTTCGTGAC GTCTCGCGTA CTAGAACTCA CCTACACTTC ACACAATCTG
GCCTCTTTCG CCCGCGATCT GGGCCATGAC GGCCCGCCCT TCGCCTGGAA CGAGGACCGC
CGCGCGCAAC TCCGCGCCGA TCTCGACGCC TTCTACGCCC GCGCCTACGG CCTGACCCGC
GACGAGCTGC GCTACATCCT CGACCCCGCC GACGTGAAGG GCCCCGACTA CCCCTCGGAA
ACCTTCCGCG TCCTGAAGGA AAAGGAAATC CGCCAACACG GCGAATACCG CACTCGCCGC
CTCGTCCTCG AAGCCTGGGA CCGGATGGCG CAGGATGGCA CGTTTGCCGC TCTCGGTATG
GCTGACAGAG CAATGGCCGT CGCTCAACAA ATCGCGCTGT CCCCGCTCAA CCAGTATGAG
GACGCAATGT GGGCGTGGCC TCAGGGTATC AATGAGCGAG ACAGAGTTCG GGCACAGCTT
CGGGCGATGG TGGGTATTCT GCCAGGGCCT TCCGATGCCC GTCGCGTCCG TCTGGCTGCA
CTCGCCTGCC TTCAGCCAGG TCTGCTGGAT GGGTTCCTGA TGGAAGCGGA TCGCCGAGAG
TGGCAACGTC TCTTGGCGCA CTCGACGGGC GCTACCCAAC TCGTTCCGCC AACGAACGCG
GCTTGGGGCG CGGCCTTCAA TGAACTTGTT TCCTCTGCGG TGTTGGATGT CTCATCAGAC
GGCACACAAT GGAGCGCAGG TTCGAGGCTT GATCGATCGA CCCTGAATGC AAGCGATCCT
GCCGTCGGCC GCGCAATCTT CGCATGGTCG AGGCTGGAAG GTGCGGACTT GGATCACGGG
CTCTCGCAGG TGTCGGCCGT AATCCTTCCG TTCATCAGGG AGGGTCGCCT TGCAGCCTGA
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| Protein sequence | MARKPITDMS AWPSLSLEGN LIAPAMIAKI DQRQAPEQSP EEYGVRKGLQ IREEIATAFR
VGQSHFDAFA KIEHPSAAAT SRFIADFFKE TFGYTDLTVA AAPIALIASD RVPVVVVPPS
ELLDRRSPTL STDRSRSPAF ALQDHLNDRD EALWGIVTNG MQLRLMRDNA SLTRPAYVEA
DLAQMFTNED IASFAVLWLM IHRTRFGAAE TTATDCPIER WRDAGSKEGE AARDRLAGQV
QLALKLLGSG FLEANPDLAA KLRSGEVNLT EWFNELLRLV YRLIFLMVAE DRNLLHPEKA
KPEARALYAQ GYSLQSLRKQ CYRAATWDKH HDRYEGVKIV FRALTHGQPA LALPALGGLF
AEDRLPHLET ARLRNRAFME ALYRLSWLAD KTGMVPVNWR AMETEELGSV YESLLELQPQ
LCDDGKTLVF ASEAAEQKGN QRKTTGSYYT PDSLVQALLD TALDPVLDKT EAEADDPAKA
LLKLSVIDPA CGSGHFLLAA ARRIATRLAR IREGGTPGLE HFRHALRDVA RCCIHGVDRN
PMAVELTKVA LWIETVDPGL PLGFFDAQIR CGDALLGVFD LQVLQDGIPD AAYKPLTGDD
RNTARYYLQA NRAATSGQGG FDFGTGQASM PAMKPLALDF SGFRDLPEDT VEQIGAKAKR
FKELRKGQTF VRAKAAADLY VAAFLLPKVG GAPAGASERT VPTTEEMWMA LNQGKMRQAM
VEAPKAARNA RALHWPLEFP DVMQRGGFDV VLGNPPWEVI QLSEKEFFAS VAPEVATLAG
AKRKAKIAKL EEINPALFMS YVLGKREFDA ANEFARASNR FSYSAEGKLN TYSLFAELFL
SLMGSGGGAG LIVPTGIATD KFNAKFFAHI SGEKMVRSLF SFENEEFVFP AIHHSIRFCL
LTLSRANIDR AEFAFFLRRI SQLEDPTRVY HLSPEEIQLI NPITSTAPIF RTRDDADLTA
AVYNRLPVLG EALTWETWRV DLIQNFFSTS NAADSEIIVR AEDMGATTGF VPVLRGTMVD
QFNHGAAAYD LTADEFIETT PLDLPESWAD VRSDKYVPID ELEKKLRALD WEDGWLAGWR
DITSAHVNRT VIASIFPKTA TDDTLSLMLP RGGATHAATL VANLNSLPLD YVARQKVGGT
HIRKYVISQF PILPPEFYSE LRLDFVTSRV LELTYTSHNL ASFARDLGHD GPPFAWNEDR
RAQLRADLDA FYARAYGLTR DELRYILDPA DVKGPDYPSE TFRVLKEKEI RQHGEYRTRR
LVLEAWDRMA QDGTFAALGM ADRAMAVAQQ IALSPLNQYE DAMWAWPQGI NERDRVRAQL
RAMVGILPGP SDARRVRLAA LACLQPGLLD GFLMEADRRE WQRLLAHSTG ATQLVPPTNA
AWGAAFNELV SSAVLDVSSD GTQWSAGSRL DRSTLNASDP AVGRAIFAWS RLEGADLDHG
LSQVSAVILP FIREGRLAA
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