| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_1493 |
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| Symbol | |
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| ID | 4580333 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | - |
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| Start bp | 1455181 |
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| End bp | 1457001 |
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| Gene Length | 1821 bp |
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| Protein Length | 606 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639768808 |
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| Product | ABC transporter related |
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| Protein accession | YP_915289 |
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| Protein GI | 119384233 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.065388 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGTGT CTGAAAACGT CGAGCGGTCG GCTGCAAGCG AAGTGCCAGA GCGGCCTGAC
TTCTTTGCCA GCCTGAAACT CCTGATGCGG TACGGGGAGG GTGCAAAGCC GCTTCTCGTG
TTGTCGGCGC TCCTGGCGAC CGGCGCCGTG GTGCTGGAGT TGGTGCCGAT CTGGGTCGTC
TGGCGATTGG TGATTGCGCT GATTGACGGG ACCGCCTCTG CAGGACTCTT CGCGAGCTAC
GCGCTGATCG CCCTGGCGGC GGTGATCGCG GGGTATCTTC TTATGGGACT GGCCTTGGGG
CTGAGCCATG TCGCCGCCTT CCGGCTGATA CATGCGTTGC GGCTGGCCAT GGCGCGTCAT
CTTGCGCGGC TTCCGATGGG CTGGTTCGCG GGGCGGCGGT CCGGCGGTGC GAAAAAGCTG
ATCGTGGATG AGCCGGAGCG GCTGGAGATC CTCGTTGCGC ATGGGCTGCC TGAAGGTGTG
TCGGCCATCG GCACTTGGCT GGCTGTGACG ATCTGGCTGT TTGCCGTCGA CTGGCGCATG
GCGCTGGCGG CTATCGTCCT CGCACCCGTG GCGTTCGGCC TGATGCTGTC CGCCATGGGA
CGCACCTCGC GGATGGTCGG GCAATATCAG GCCGCCGGTG AGCGCATGAA TGGCGCGATT
GTGGAGTATT TGGCCGGGAT GGCGGTCATC AAGATCTTCA ACCGCAGCGG CGAAAGCCTT
GGTGAGGCCG CTACTGCGGT GCGCGACTAC GCGGCGATAG AGACGGAGAT GGGGCGCCAG
TTCGTGCCGC GCGGAGCGCT GTTCTATACG CTGGTGGTGG CCAACATCTG CGTGATCCTG
CCTGTTGGCA TGCTGTTGAT GCGCAGCGGC ACGCTGAATC TGACGGGGCT GGCTTTCTTC
GTCATCCTTG GAGCGAATTA CAGTCAGCCG CTGCTCAAGC TGTTCAATCT CTTCCACAAT
ATGGCGCATA TCTCGATGGC GTCGACGCTG ATTGAAGACG TGTTGGGCAC CCAGACCCAG
ACCGATACCG GGAAACGGAT CGAACTGCCG AACCGCGAGG TCAAGTTTGA GAACGTGCGC
TTTGGGTATG ACGCCCATGA GGTGATCCAT GACGTCAGTT TCACTGCCGG GGACGGCGCG
GTCACGGCAC TGGTCGGTCC CTCCGGGTCG GGCAAGAGCA CGCTGGCCAG TCTGATCCCG
CGGCTACACG ACGTATGGGA GGGGCGGATC ACCCTAGGCG GCACGGATAT CCGTGACATC
GGGATCGACC AGTTGATGGA GGAAGTGGCC TTCGTGTTCC AGGACACCTT CCTGTTCAGT
GGTACGATTG CCGAGAACCT CCGCCTGGGC AAAGCCGGCG CGACCGAAGC AGAGCTTCAT
GCCGCTGCCC GCGCCGCACG TGCGCACGCG TTCATTACTG CGCTGCCCGA TGGCTATGAG
ACGAAGCTGG GCGAAGGCGG TGCGGCGCTC TCCGGTGGGG AGCGCCAACG CCTCGCCATT
GCCAGGGCCA TCCTGAAGAA CGCGCCAGTC ATCGTGCTGG ATGAGGCCAC GGCCTTCGCC
GACCCCGACA GCGAGGCAGC CATCCAGGAG GCGCTGAGCG AGCTGGCCAG AGACCGCACG
CTGATCGTGG TGGCGCATCG GCTGCACACG ATCATGGGAG CCGACCGGAT CGTTGTGCTG
GATCAGGGGC GATTGGCCGA GACCGGGCGG CATGGGGACC TGGTTGCACA GGGCGGGCTC
TATGCCCGGC TCTGGGCAGA TTACACGGCG GCTCAGGCAA TCTCGCTGCG CGGCAATCAG
GCAGCGGAGG CAGCCCAATG A
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| Protein sequence | MAVSENVERS AASEVPERPD FFASLKLLMR YGEGAKPLLV LSALLATGAV VLELVPIWVV
WRLVIALIDG TASAGLFASY ALIALAAVIA GYLLMGLALG LSHVAAFRLI HALRLAMARH
LARLPMGWFA GRRSGGAKKL IVDEPERLEI LVAHGLPEGV SAIGTWLAVT IWLFAVDWRM
ALAAIVLAPV AFGLMLSAMG RTSRMVGQYQ AAGERMNGAI VEYLAGMAVI KIFNRSGESL
GEAATAVRDY AAIETEMGRQ FVPRGALFYT LVVANICVIL PVGMLLMRSG TLNLTGLAFF
VILGANYSQP LLKLFNLFHN MAHISMASTL IEDVLGTQTQ TDTGKRIELP NREVKFENVR
FGYDAHEVIH DVSFTAGDGA VTALVGPSGS GKSTLASLIP RLHDVWEGRI TLGGTDIRDI
GIDQLMEEVA FVFQDTFLFS GTIAENLRLG KAGATEAELH AAARAARAHA FITALPDGYE
TKLGEGGAAL SGGERQRLAI ARAILKNAPV IVLDEATAFA DPDSEAAIQE ALSELARDRT
LIVVAHRLHT IMGADRIVVL DQGRLAETGR HGDLVAQGGL YARLWADYTA AQAISLRGNQ
AAEAAQ
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