Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_1480 |
Symbol | |
ID | 4580320 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008686 |
Strand | - |
Start bp | 1440989 |
End bp | 1441771 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639768795 |
Product | conjugal transfer protein TrbJ |
Protein accession | YP_915276 |
Protein GI | 119384220 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG5314] Conjugal transfer/entry exclusion protein |
TIGRFAM ID | [TIGR02780] P-type conjugative transfer protein TrbJ |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.10056 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACACGCA AGATCACGTT TCGGTTCGCC GGCCCGTCGC TGCTCGCTCT CGCGCTGGCG ATGCCCATGG CCATGTCGCC CATCGCAGCG CCGCCCGCCC ATGCGCTCTT CGGTATCGGC GGGGGGCCTT TCATCGTCTA CGACCCGACC AACCACGCGG AAAATCTCCT GACCGCGGCG CGCGCACTGG AGCAGATCAA CAACCAGATC GCACAGCTCC AGAACGAAGC GCAGATGCTG ATAAACCAGG CGCGCAATCT CACCAACCTG CCGTATTCCG CGATCCAGCA GATCCAGCAG AACGTCAGCC GCACGCAGCA ACTCCTGGCG CAGGCGCAAA ACATAGCCTT CGATGTGCAG AGCATCGACC AGATGTTCCA GCAGGACTAT GGCAACCTCT CCCTGACGGC GACCGACCAG CAACTGATCG CCGAGGCCCG GTCGCGTTGG GAGAACACCG TCGGTGGCCT GCAGGATGCC ATGCGCGTGC AGGCCGGAGT CGTTGGCAAT ATCGAAGCCA ATCGCGCCGA GATGTCCGCG CTCGTGGGGC AGAGCCAGAA CGCGGTTGGC GCTCTGCAGG CCACGCAGGC GGGCAACCAA CTCCTCGCAC TGCAATCGCA GCAGCTATCG GACCTGATCG CGGTGATCTC GGCAAACGGT CGCGCCAACG CGCTGACCGA GGCCGAGCGC GCCACCGCTG CAGAACAGGG TCGCATCCAG CGCGAGCGCT TCCTGACGCC GGGCGCGGGC TATCAACCCG GCAATGCGCA GATGTTCAAC TGA
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Protein sequence | MTRKITFRFA GPSLLALALA MPMAMSPIAA PPAHALFGIG GGPFIVYDPT NHAENLLTAA RALEQINNQI AQLQNEAQML INQARNLTNL PYSAIQQIQQ NVSRTQQLLA QAQNIAFDVQ SIDQMFQQDY GNLSLTATDQ QLIAEARSRW ENTVGGLQDA MRVQAGVVGN IEANRAEMSA LVGQSQNAVG ALQATQAGNQ LLALQSQQLS DLIAVISANG RANALTEAER ATAAEQGRIQ RERFLTPGAG YQPGNAQMFN
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