| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_1475 |
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| Symbol | |
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| ID | 4580296 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | - |
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| Start bp | 1436499 |
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| End bp | 1437620 |
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| Gene Length | 1122 bp |
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| Protein Length | 373 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639768790 |
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| Product | conjugation TrbI family protein |
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| Protein accession | YP_915271 |
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| Protein GI | 119384215 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2948] Type IV secretory pathway, VirB10 components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGACA CCGATCCTGC AGCTACGATG CGTCTGCGTC CCGATCCGCC GCGCGTGACC
AGGCTGTCGC GCAGGGTTCT GGCCGGTGCC GGAGCGGTCG CGCTGTTCGG CATCGGGGGT
GCTATGATCT ATGCGCTCCA GACCCGTGAG GCCGGGCCGG GAGGCGGAGA ACTCTATTCC
ATCGACAACC GACCGGCCGC GGACGGCCTG GAAGGGTTGC CCTCCGACTA TACCGGACCG
GTTCTGGGAC CCGCACTGCC CGGTGACCTC GGGCGGCCGA TCCTCGACGC GCAGGAGCGG
GGAGTGCCCG TGACCCCGCC GCCGATTGTC GGCCCGACCG TCGATCCGGA AGCGGAGCGC
CGCAGGGCAG AGGAGGAAAC CGCGCGTCTG AGCGGTGTCT TCTTCCAGAC GGCATCTGGC
AGGGCAACGA CGGCCGGGGT CGGCGTGAAC CTTCCGGGCC TGGGGGGCTC CGAGCAACCT
GAGGGAAACC GGCATACGGC TTTCCTCAAC GATCAGGTGG ATCGGCAGAC CGTCGCATCG
GATCGCATTC AGCCGCCAGC CTCGCCGTAC ATCCTTCAGG CGGGAGCTGT GATTCCGGCC
GCGCTCATCA CCGGCATTCG CTCCGATCTC CCGGGGCAGA TCACCGCGCA GGTCACCGAG
AATGTCTATG ACAGCCCGAC CGGATCACTG CTATTGATCC CACAAGGAAC CCGCATCATC
GGCCAATACG ATGACGGAGT GACGTTCGGC CAACGCCGCG TGCTGTTGGT CTGGAACCGC
TTGATCCTTC CCGGTGGCCG ATCCATCGTT CTCGAACGTC TGCCAGGCGC GGATGCGAGC
GGCTATGCCG GCCTCGAAGA TGGCGTTGAT TACCATTGGT GGGATCTGAT GCGCGCGGCG
GGTCTGTCCA CGCTGCTCGC GATCGGCGCG GACCTCGCCA CCGATGATGA AGACCGTCTG
GTCGAGGCGA TCCGCGATGG CGCGGTGGAT ACAATTAACC AGGCCGGCCA GCAGATCGTC
GGGCGTCAGT TGCAGGTCGC GCCGACACTG ACCATTCGCC CGGGGTTCCC GGTCAGGATC
ATCGTCACCC GCGATCTGGT ATTCGAACCG GCAGGAGGTT GA
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| Protein sequence | MSDTDPAATM RLRPDPPRVT RLSRRVLAGA GAVALFGIGG AMIYALQTRE AGPGGGELYS
IDNRPAADGL EGLPSDYTGP VLGPALPGDL GRPILDAQER GVPVTPPPIV GPTVDPEAER
RRAEEETARL SGVFFQTASG RATTAGVGVN LPGLGGSEQP EGNRHTAFLN DQVDRQTVAS
DRIQPPASPY ILQAGAVIPA ALITGIRSDL PGQITAQVTE NVYDSPTGSL LLIPQGTRII
GQYDDGVTFG QRRVLLVWNR LILPGGRSIV LERLPGADAS GYAGLEDGVD YHWWDLMRAA
GLSTLLAIGA DLATDDEDRL VEAIRDGAVD TINQAGQQIV GRQLQVAPTL TIRPGFPVRI
IVTRDLVFEP AGG
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