Gene Pden_1423 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_1423 
Symbol 
ID4580478 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp1390665 
End bp1391582 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content70% 
IMG OID639768739 
ProductFAD-dependent pyridine nucleotide-disulphide oxidoreductase 
Protein accessionYP_915220 
Protein GI119384164 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0492] Thioredoxin reductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCACG ATGTTCTCGT CATCGGCGGC AGCTTTTCCG GACTTGCCGC CGCGATGCAG 
CTTGCCCGCG CCCGTAGACG CGTCTGCGTT CTCGACACCG GCGCACCCCG CAACCGCTTT
GCCGCCGCCT CTCACGGGTT TCCCGGGCAG GACGGGCGTC CCCCGCAGGA CATCCGCGCC
GCGCTCAGAC ACGAACTCGC GGTCTACCCT ACTCTGTCCT TAAGGGACGG CGCGGCGGTC
TCGGCTGCGC GCGAGGGGAA CGGATTTCGG GTGGCCTTGG CAGAGGGCAG AGACATCACC
GCGCGGCGGC TGGTCCTGGC CTTCGGTGTG CGCGACAGCC TGCCCGATCT GCCAGGTCTG
TCCGAACGCT GGGGAGCCAC AGTGCTCCAT TGCCCCTATT GCCACGGCTA TGAGCTGAAC
GGCGGGCCGG TCGGCGTTCT GGCGCGCGGC GAGGCGGCGC TGCATCAGGC GATGCTGCTG
CCCGACTGGG GGCCGACCAC GCTCTTCACG CAAGGGGCGC TCGTGCTGAC TAGGGAACAG
CGGCAGGGGC TGACCGCCCG GGGCGTCACG GTCGAGAAAA CGCCTGTCGC GGCGCTGATC
GGCACCGCCC CGGCGCTTGA CGGGGTGCGG CTGGATGACG GGCGAGAGAT CGCGCTGGCG
GGGCTGTTCC TGGCGCCGGA CACAGCGCCC TCCTGCGATT TGGCTGCACA GCTAGGCTGC
ACCATGAAGG ACGGACCAAC CGGCCCCTAT GTGGCCGTCG ATCCGATGCA GGCGACCAGC
CAGCCCGGCG TCTTCGCCGC CGGCGACCTT GCCAGCCCCA TGCCCAATGC CACGATCGCC
GCGGCCGCGG GCGTGATGGC AGGCGGCGCC GCGCATCGCT CGCTGATCTT CGATCCCGAT
CTGACCGCTG CGGCCTGA
 
Protein sequence
MDHDVLVIGG SFSGLAAAMQ LARARRRVCV LDTGAPRNRF AAASHGFPGQ DGRPPQDIRA 
ALRHELAVYP TLSLRDGAAV SAAREGNGFR VALAEGRDIT ARRLVLAFGV RDSLPDLPGL
SERWGATVLH CPYCHGYELN GGPVGVLARG EAALHQAMLL PDWGPTTLFT QGALVLTREQ
RQGLTARGVT VEKTPVAALI GTAPALDGVR LDDGREIALA GLFLAPDTAP SCDLAAQLGC
TMKDGPTGPY VAVDPMQATS QPGVFAAGDL ASPMPNATIA AAAGVMAGGA AHRSLIFDPD
LTAAA