Gene Pden_1245 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_1245 
Symbol 
ID4580011 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp1207849 
End bp1208487 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content71% 
IMG OID639768563 
Product2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase 
Protein accessionYP_915046 
Protein GI119383990 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0800] 2-keto-3-deoxy-6-phosphogluconate aldolase 
TIGRFAM ID[TIGR01182] Entner-Doudoroff aldolase 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.27666 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCCCG AACAACAGTC CCAGAAGACC CGCGCGCTTT GCGAACTCGC CCCGGTCATC 
CCGGTCCTGG TGGTCGGCGA CGCGACCCGC GCCGAAGGGT TGGCGACGGC GCTGGTCGCC
GGCGGCCTGC CGGTGCTGGA GGTGACCCTG CGCACCCCCG CCGCATTGCA GGTGATCGGC
GAAATGTCCA AGGTGCCGGG CGGCCATGTC GGCGCGGGCA CGGTGCTGAC ACCCGACGAC
GCCAAACGCG CGAAGGATGC CGGCGCCAGC TTCGCCGTCT CGCCGGGCGC GACCGAGCGG
CTGGTGCGCG CCTGCGAGGA TATCGGCCTG CCCCTCCTGC CCGGCGCCGT CACCGCATCC
GAGGTGATGC GGGCGATGGA AATGGGCTTT TCCATGCTGA AGTTCTTTCC GGCCGAGGCG
GCGGGCGGCG CAAAATCGCT GAAATCGCTG GCCGGGCCGC TGCCGCAGGT CAGCTTTTGC
CCGACCGGCG GCGTGACCTT GCAGAACGCC CCCGACTACC TAGCGCTGCC GAACGTGATC
TGCGTCGGCG GCAGCTGGAT CGCGCCGGAT GCTGATGTGG CCGCCGGCGA TTGGGCGGCG
ATCGAATCCC GCGCCCGCGA CGCGCGCACC CTGCGCTAG
 
Protein sequence
MTPEQQSQKT RALCELAPVI PVLVVGDATR AEGLATALVA GGLPVLEVTL RTPAALQVIG 
EMSKVPGGHV GAGTVLTPDD AKRAKDAGAS FAVSPGATER LVRACEDIGL PLLPGAVTAS
EVMRAMEMGF SMLKFFPAEA AGGAKSLKSL AGPLPQVSFC PTGGVTLQNA PDYLALPNVI
CVGGSWIAPD ADVAAGDWAA IESRARDART LR