Gene Pden_1183 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_1183 
Symbol 
ID4580066 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp1154430 
End bp1155110 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content65% 
IMG OID639768499 
ProductGntR family transcriptional regulator 
Protein accessionYP_914984 
Protein GI119383928 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCATTCA AGGAAGCAGA GGTTCCGAAC CTTGGGCTGG CCCCGACCGC CTCGGACATC 
ATCCTGAAAT TCATCCGCGA TTCCATCGCC GACGGGTCGC TGGACGAGGG CGAGCCGATC
CGCCAGGACG ATGTCGCAAG GATGTTCAAC GTCAGCAAGA TCCCGGTCCG CGAGGCACTG
AAGCGGCTGG AGGCCGAGGG GCTGGTCGAG TTCCAGCGCA ACAAGGGCGC CATCGTCACC
TCGGTATCCG AGCCCGAGAT CGCCCAGATC TTCGAGACCC GCGCCATCCT GGAATCGAAC
GCGATCAGGC TGTCGGTGCC GCATATGACG CCCGAGACCT TCACCGATGC CGAGGAGTTC
TGCGACGCCT TCGCCAGGGA AACGGACGTG GCGCAATGGT CGGCGCTGAA CTGGCAGTTC
CACAGCCGGT TGTATCTGGA TGCGCAAAGG CCGTTCCTGG TCCGCACGAT CCGCTCGGTC
AACGACCGGC TGGAGCGCTA CCTGCGCATC CAGCTTGCCC TCTCGCACGG CCAGGGCACC
GCGGATCGCG AACATCGCGA GATCCTCGCC GCCTGCCGCG CGGGCGATGC GGAAAAGGCG
GGCAAGCTCG TCTACGACCA TATCATGGGG GCCTGCTCGT CCCTGCTGCA CCACCTGCCG
GCAAGCAAGA GCGGCCGCTG A
 
Protein sequence
MPFKEAEVPN LGLAPTASDI ILKFIRDSIA DGSLDEGEPI RQDDVARMFN VSKIPVREAL 
KRLEAEGLVE FQRNKGAIVT SVSEPEIAQI FETRAILESN AIRLSVPHMT PETFTDAEEF
CDAFARETDV AQWSALNWQF HSRLYLDAQR PFLVRTIRSV NDRLERYLRI QLALSHGQGT
ADREHREILA ACRAGDAEKA GKLVYDHIMG ACSSLLHHLP ASKSGR