Gene Pden_1166 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_1166 
Symbol 
ID4579931 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp1136932 
End bp1138197 
Gene Length1266 bp 
Protein Length421 aa 
Translation table11 
GC content66% 
IMG OID639768482 
Productmajor facilitator transporter 
Protein accessionYP_914967 
Protein GI119383911 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2223] Nitrate/nitrite transporter 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCGAG GAACCGGACA TCCCGCCCGC CCATCTCCCG GAAAGCTTGC CGACATGACC 
ACCACCACCA TGCCCGTCGC CCGCGCCAGA ACCCATGTGA CCGTGCTTCT GCTGCTGGGC
CTGACGCATC TGCTCAACGA CATGATGCAG TCGCTGATCC CTGCCGCCTA TCCGATCCTC
AAGGATGCCT ATGGGCTGGA TTTCGTGCAG ATCGGCATGA TCACCCTGAC CTTCCAGATC
GCCGGGTCGC TGTTGCAGCC GGTGATCGGC ATGGTGACGG ATCGCCATCC GGCGCCCTAT
TCGCCGGTGG TGGGCATGAT GTTCACCCTG TCGGGACTGG TCAGCCTGGC CTTTGCCCAC
AGCTATGCGG TCGTCCTGGT CTCGGTGGCG CTGATCGGCA TCGGCTCGTC GATCTTCCAC
CCCGAGGCGA CGCGGATGGC GCGCTATGCG GCGGGCGGCC GGCAGGGGCT GGCCCAGGGC
ATCTTCCAAG TCGGCGGACA GGCGGGCGGC GCGCTGGGGC CCGTCTTTGC GGCGCTGGTC
ATCGTGCCCT GGGGCCAGCC GAGCCTCGCC TGGTTCGCCG TCGCCGCCCT GATGGCCATG
ATGCTTCTGG TCTGGATCGG CAGCCGGCAG CGGCAGATCA GCGCCGAATT CGTGGCGATG
CGCTCGGCCG GCAGGAAGGG TGGCGGCGGT CACGTCGCGC ATGCGCCCTT CACCATCGGC
GTCGGGCTGG TGGTGCTGAC GCTGCTGATG TTCTCCAAGA ACGCCTATGG CGAAAGCTTC
CGCTCGTTCT ACACCTTCTA CCTGATGGAC CGTTTCGGGC TGTCGATCCC CTCGGCGCAG
ATGATGCTGT TCGTCTTTCT TCTGGCTTCG GCGGCGGGGG CGCTGATCGG CGGTATCGTC
GGCGACCGCA TCGGACGCTA TCGCATCATC TGGATCTCGG TCCTGGGGCC GCTGCCGCTG
ACGCTGGTGC TGCCCTATGC GGACCTGTTC TGGACCGGCG TGCTGACGGT GGCGATCAAC
CTGATCATGG CCAGCGCCTT CGCCTCGATC CTGATCTATG CGATGGAACT GCTGCCCGGC
CGCATCGGGT TGATCGGCGG GCTGTTCTAT GGGCTGAACT TCGGCCTTGG CGGCATCGCC
GCGGCGATCC TTGGCGGGCT GGCCGAGAGC TACGGGGTCG AGACGGTCTA TCGGTTGTGT
TCGTTCCTGC CGCTGGCCGG ATTGCTGGCC TGGTTCCTGC CCAGGATCGA CGACGGCAGG
GGATAG
 
Protein sequence
MARGTGHPAR PSPGKLADMT TTTMPVARAR THVTVLLLLG LTHLLNDMMQ SLIPAAYPIL 
KDAYGLDFVQ IGMITLTFQI AGSLLQPVIG MVTDRHPAPY SPVVGMMFTL SGLVSLAFAH
SYAVVLVSVA LIGIGSSIFH PEATRMARYA AGGRQGLAQG IFQVGGQAGG ALGPVFAALV
IVPWGQPSLA WFAVAALMAM MLLVWIGSRQ RQISAEFVAM RSAGRKGGGG HVAHAPFTIG
VGLVVLTLLM FSKNAYGESF RSFYTFYLMD RFGLSIPSAQ MMLFVFLLAS AAGALIGGIV
GDRIGRYRII WISVLGPLPL TLVLPYADLF WTGVLTVAIN LIMASAFASI LIYAMELLPG
RIGLIGGLFY GLNFGLGGIA AAILGGLAES YGVETVYRLC SFLPLAGLLA WFLPRIDDGR
G