| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_1111 |
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| Symbol | |
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| ID | 4580445 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | - |
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| Start bp | 1086592 |
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| End bp | 1088076 |
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| Gene Length | 1485 bp |
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| Protein Length | 494 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639768430 |
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| Product | NCS1 nucleoside transporter |
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| Protein accession | YP_914915 |
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| Protein GI | 119383859 |
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| COG category | [F] Nucleotide transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG1953] Cytosine/uracil/thiamine/allantoin permeases |
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| TIGRFAM ID | [TIGR00800] NCS1 nucleoside transporter family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.502762 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACAAG TCGAGGCAAC CGCCTATGAA ATGCTGTCCC GGTCGGGCCT GCCGGCCGAT
GACCTGGACC CGGACCTCTA CAACGAGGAC CAGTTGCCCA CAACTGTCGC GGAACGGACC
TGGACCTGGG TCTCGATCTC GGCGCTTTGG GTCGGGATGG TCGTCTGCAT CCCGACCTAC
CTGCTGGCCT CGTATCTGAT CGGGGCGGGG ATGGACTGGA AGCAGGCGGT GATCACCATC
CTTCTGGCCA ATGCCATCGT GCTGATCCCG ATGGTGCTGA TCGGCCATGC CGGGGCCAAA
TACGGCATTC CGTTCCCGGT GCTCTTGCGT TCCTCCTTCG GGCCGATGGG CGCGCGCATT
CCCGCCGTGG CGCGCGGCAT CGTCGCCTGC GGCTGGTTCG GGATCCAGAC CTGGGTGGGC
GGCTCGGCCA TCTATGTCAT CCTGAACACG CTGTCGGGCG GGCTTTTCGC CTCCGAGGCG
CTGCCGATCC TGGGCATCAA CCTGACCGAG TTCCTGTGCT TCCTGGCCTT CTGGGGGCTG
CATCTCTATT TCATCAAGCA CGGAACGGAA TCGATCCGCT GGCTCGAGAC CTGGTCGGCA
CCCTTCCTCA TCGCCATGGG CCTGGCGCTG CTGGCCTGGG CCTGGGTCAA GGCCGGAGGC
TTCGGCCCGA TGCTGTCCGC ACCCAGCCAG TTCGCCCCCG GCCAGCCGAA AGAGGGGCAG
TTCTGGTCCG TCTTCTGGCC CAGCCTGACC GGCATGATCG GCTATTGGGC GACTCTGGCG
CTGAACATTC CCGACTTCAC CCGCCATGCC CGCAGCCAAA AGGACCAGTT CCTGGGCCAG
TTGATCGGCC TGCCGCTGCC GATGGCGCTA TTCGCCTTCA TATCGGCCGC GGTGACCTCG
GCCACGATCG TCATCTATGG CGAGGCGATC TGGGACCCGA TCCAGCTGAC CGAGCGGATG
GGCGGCGTCG GCATCATCGT CGCGCTGGTG GCGCTGATCG TGGCGACGCT GACCACCAAC
CTCGCGGCCA ACGTGGTCGC TCCGGCGCAC GGCTTTTCGA ACCTCGCGCC CAGCAGGATC
AACCTGCGTC GCGGGGGCTA CATCACCGCC GCGATCGGGC TGGCCATGTT CCCCTGGCTG
CTGATCAACC ACATCGTCGA TCTGCTGGTG GCGTTCTCGG CCCTGCTGGG TCCGATCGCA
GGCGTCATGC TGGCGGATTA CTACCTGCTG CGCGGCACCC GGCTGAGCGT TCCCGACCTT
TTCCGCCGCG GCGGCATCTA CGAGGGCTCG GGCGGCAACA ACTGGGCCGG GATCGGGGCC
TTGATCCTGG GCATCCTGCC CAATATTCTG GGCTTCATGG TGGCCATCGG CCTGTCGTCC
AGCGCGCCGG CCCTGTTCAT GTCGATCTAT ACCTATGCCT GGTTCGTCGG CCTGTTCGTG
GCGGGAATCG CCTATCTGGT CCTGTCGAAA CTCTTGAACC GTTGA
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| Protein sequence | MTQVEATAYE MLSRSGLPAD DLDPDLYNED QLPTTVAERT WTWVSISALW VGMVVCIPTY
LLASYLIGAG MDWKQAVITI LLANAIVLIP MVLIGHAGAK YGIPFPVLLR SSFGPMGARI
PAVARGIVAC GWFGIQTWVG GSAIYVILNT LSGGLFASEA LPILGINLTE FLCFLAFWGL
HLYFIKHGTE SIRWLETWSA PFLIAMGLAL LAWAWVKAGG FGPMLSAPSQ FAPGQPKEGQ
FWSVFWPSLT GMIGYWATLA LNIPDFTRHA RSQKDQFLGQ LIGLPLPMAL FAFISAAVTS
ATIVIYGEAI WDPIQLTERM GGVGIIVALV ALIVATLTTN LAANVVAPAH GFSNLAPSRI
NLRRGGYITA AIGLAMFPWL LINHIVDLLV AFSALLGPIA GVMLADYYLL RGTRLSVPDL
FRRGGIYEGS GGNNWAGIGA LILGILPNIL GFMVAIGLSS SAPALFMSIY TYAWFVGLFV
AGIAYLVLSK LLNR
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