Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_1098 |
Symbol | |
ID | 4578794 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008686 |
Strand | - |
Start bp | 1072561 |
End bp | 1074150 |
Gene Length | 1590 bp |
Protein Length | 529 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639768417 |
Product | glucose-methanol-choline oxidoreductase |
Protein accession | YP_914902 |
Protein GI | 119383846 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACTGGG CGGATTACGT CATCGTCGGC GGAGGATCGA CTGGCTGCGT CATGGCGTCG CGTCTCAGCG AGGACGCCGA TACCCAGGTC GTCCTGCTGG AGGGAGGCCC GCGCGACCGG AACCCCTATA TCCACATCCC CGGCGCCTAT TACAAAACCG CGCAGGGTCC GTTGCTCAAG CGCTTCCCCT GGGAGCCGAC GGATGGGCAG AATCGCACGG AGCAGCCGAC GATGGTGCAG GCCAGCGTGT TGGGCGGCGG CTCTTCGGTC AATGCGATGA TCTATGTCCG GGGCAATCCA GACGATTACG CGACATGGGA AAACCTGGGG GCGTCCGGCT GGGGTTATCA GGACGTCCTG CCCTATTTCC GCAAGGCCGA GAACAACAAC CGCTTCTGCA ACGAGGCCCA CGGCATCGAC GGGCCCCTGG GGGTCTCGGA CATCGACCAT ATCCATCCGC TGACCCGCGC CTGGCTGCAA GCTTGCCAGC AAAAGGGACT GCCGCTGAAC CCGGATTTCA ACTCGGGCGA TCAGGCCGGC TGCGGGCTCT ACCAGATCAC CGCGCGGAAC GGACGCCGCA GCAGCGCGGC AGTCGCCTAT CTGAAGCCCG CGCGCAAACG CAGGAACCTC TCGGTGCGCA CCGGGGCGCG GGTGCTGCGC GTGCTGGTCG AGAACGGTCG CGCTACGGGT GTCGAATATG TCGCCAAGGG TCGGACCCGG ACGATCCGCG CCCGGCGCGA GGTCATCCTG TCGGCGGGCG GAATCAATAC GCCCAAGCTC CTGATGCTGT CCGGCATCGG TCCGGCGGAC GAACTGCGCC GCCATGGAAT CGAAGTCGTC CACGACCTGC CGGGCGTCGG GCAGAACCTT CAGGACCATA TCGAGATTTC GCTGATCTAT CAGCTCAATG GTCCGCACAG CTACGACAAG TACAAGAAGC TGCACTGGAA GGCGCTGGCG GGGCTGAACT ACCTGCTGTT CAAGGGTGGC CCGGCTTCCT CCAACCTGAT CGAGGGCGGC GCCTTCTGGT GGGCCGACCG GGCGGAAAAG CGTCCCGATG TGCAATATTT CATGGTCGTC GGCGCGGGGG TCGAGGAAGG GGTCGAAGCC GTGCCAGGCG GCAATGGCTG CACGATCAAC CTTGGCCAGA TCCGCCCGCG CTCGCGCGGC GAAGTGCGGC TGACCAGCGC GGATCCCGCC GCCTTCCCCC GCGTGATCCC GAATTATTTC AGCGATCCCC ATGATCTGGA AACCATCACC GACGGCGCCA TGTTCGCGCT GGAGGTGATG GAGCAATCCG CGATCAGCCG CTATGTCGAG CGCCGCCAAT TGCCCGAGGC CGGGCCCGTC ACCCGCGATC AGATCCGGCG CTTCTGCCAG ACCACGGCCC ATGCGGCTTT GCACCCGGCG GGCACCTGCC GGGCCGGAGT GGATGACATG GCGGTCGTCG ATCCGCAATT GCGCGTCCAT GGCATCGAGG GGCTGAGGGT CGCCGATGCC TCGATCATGC CGACGCTGAT CTCGGGCAAC CCGAACGCGG TCTGCATCAT GATCGGCGAG AAGCTGTCGG ACATGATGCG GCGCAGCTGA
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Protein sequence | MDWADYVIVG GGSTGCVMAS RLSEDADTQV VLLEGGPRDR NPYIHIPGAY YKTAQGPLLK RFPWEPTDGQ NRTEQPTMVQ ASVLGGGSSV NAMIYVRGNP DDYATWENLG ASGWGYQDVL PYFRKAENNN RFCNEAHGID GPLGVSDIDH IHPLTRAWLQ ACQQKGLPLN PDFNSGDQAG CGLYQITARN GRRSSAAVAY LKPARKRRNL SVRTGARVLR VLVENGRATG VEYVAKGRTR TIRARREVIL SAGGINTPKL LMLSGIGPAD ELRRHGIEVV HDLPGVGQNL QDHIEISLIY QLNGPHSYDK YKKLHWKALA GLNYLLFKGG PASSNLIEGG AFWWADRAEK RPDVQYFMVV GAGVEEGVEA VPGGNGCTIN LGQIRPRSRG EVRLTSADPA AFPRVIPNYF SDPHDLETIT DGAMFALEVM EQSAISRYVE RRQLPEAGPV TRDQIRRFCQ TTAHAALHPA GTCRAGVDDM AVVDPQLRVH GIEGLRVADA SIMPTLISGN PNAVCIMIGE KLSDMMRRS
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