| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_1090 |
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| Symbol | |
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| ID | 4578786 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | - |
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| Start bp | 1063371 |
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| End bp | 1064624 |
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| Gene Length | 1254 bp |
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| Protein Length | 417 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639768409 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_914894 |
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| Protein GI | 119383838 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAACC TATTTCCCGC CCTTCTCGCC AGCTCGGCAT CGCTGATCGC CGCGATGCCC
GCTCAGGCCG AGGTACAGCT CGAGGTCATG CATCACTGGG TGGCCGAAAG CGAAGCCGCC
GCGCTCAACG TCGTCCGGGA AGCACTGGCT GCCAAAGGCT ACGGCTGGCA GGACAGCGCC
GTGGGCGGAC AGTCCGGCGG CAACATGCAG CAGGCGTTGC GCTCGCGCCT GGCCTCTGGC
AACCCGCCCG GCGCCATGCA GTTCATCGGC TGGGAGGGGA TCGACTGGTC GGCCGAGGGC
GTGATGCGCG AGCTCAACGC GCTTGACGAG GCGAATGGCT GGGAGGCCGC CATTGCGCCG
CAGGTGCTGC CCTTCGTCAA GAACGGCGAC GACCTGATCG CGGCGCCCAT CAACATGCAT
CGCCAGAACT GGGTCTGGGC GAACAAGGCC GCCTTCGACA AGGCCGGCAT CGAGCAGCCC
GGCACCTGGG CCGAACTGAT CGAGGACGGG GCGAAGCTGA GGGAGGTCGG CGTCATCCCG
CTGGCCATGG GCGACGAGCC CTGGCAGATC CAGGTGATAT TCGACGCGCT CGTCGCGGAT
ATCGGCGGGC CGGAATTCTA CAACAAGGCG CTGGTCGAAC TGGACCCCGA GGCGCTGTCC
TCGGACACCA TGAAACAGGT CTTCGACACG CTGCGCCAAG TGCGGGGGCT GGTCGACGAC
GGTTTCACCG GCCGCGACTG GGCCGTGGCC TCGGGCATGG TCATCAACGG CCAGGCCGGG
ATGCAGATCA TGGGCGACTG GGCCAAGGGC GAATTCCTGG CCAAGGGCCT GAAGCCGGGC
GAGGATTTCC TGTGCTTCGC GACGCCATCG GAAACCCCGT CCTTCCAATG GCTGATCGAC
AGTTTCGGCA TGTTCAAGGT GACCGATCCC GAGGTGACCA AGGCGCAGGA CGCCCTGGCC
GAAGTGGTCA TGGGCCCCAA GGTCCAGCAT GACTTCAACC TGATCAAGGG CTCGATCCCG
GCCCGCACCG ACCTGCCGGT GGACGATTTC GACGATTGCG CGAAGAAGGG CTTCGAGGAT
CGCGCCATCG CGATCGAGAA CGGCGCCATG CTCGGGGCCT CGACGCATGG CTTCGCCAGC
CAGCCCCAGT TCGCCACCGT GTTCGGGGAT GTCGTGGCGC AGTTCTTCGT CAACGACATG
GCCTCGGAAG ACGCCGTGCA GATGCTGGTC AGCGGAATCG ACAACGCCCG CTGA
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| Protein sequence | MKNLFPALLA SSASLIAAMP AQAEVQLEVM HHWVAESEAA ALNVVREALA AKGYGWQDSA
VGGQSGGNMQ QALRSRLASG NPPGAMQFIG WEGIDWSAEG VMRELNALDE ANGWEAAIAP
QVLPFVKNGD DLIAAPINMH RQNWVWANKA AFDKAGIEQP GTWAELIEDG AKLREVGVIP
LAMGDEPWQI QVIFDALVAD IGGPEFYNKA LVELDPEALS SDTMKQVFDT LRQVRGLVDD
GFTGRDWAVA SGMVINGQAG MQIMGDWAKG EFLAKGLKPG EDFLCFATPS ETPSFQWLID
SFGMFKVTDP EVTKAQDALA EVVMGPKVQH DFNLIKGSIP ARTDLPVDDF DDCAKKGFED
RAIAIENGAM LGASTHGFAS QPQFATVFGD VVAQFFVNDM ASEDAVQMLV SGIDNAR
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