Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_1086 |
Symbol | |
ID | 4578782 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008686 |
Strand | - |
Start bp | 1058907 |
End bp | 1060412 |
Gene Length | 1506 bp |
Protein Length | 501 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639768405 |
Product | glucose-methanol-choline oxidoreductase |
Protein accession | YP_914890 |
Protein GI | 119383834 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCACGG ACAGCGATGT CGTCATCATC GGTTCGGGCA TCGGGGGCGC CACGCTCGCC TCGGAGCTGG CTCCTTCGGG TGCGCGGATC CTGATCCTGG AACGCGGCGA GCATCTGGCC GACACGCCCG AGGCGCGCGA CGATATGGCG ATCTTCGAGC GGGGCTTCTA TCGCTCGGAC GAGGAATGGA TCGGCTCCGA CGGCAAGAAA TTCCTGCCGG GGAACTATTA CTACGTCGGC GGCAACTCGA AATTCTACGG CGCGGTGATG TATCGCTACC GCGTCGAGGA TTTCAGGGCA CGCCCGCATC TGCAGGGCAC CTCGCCCGGC TGGGATATGT CCTATGACGA CATGGAGCCG TGGTATGCCC GGGCGGAGGC GCTGTTCAAG GTGCGCGGCG CGACCGGGCA GGACCTGACC GAGCCTCCCC GGTCGGGTCC GTTTCCTTTT CCGCCGGTCC CGGACGAGCC GGCGCTGCAG CTGGTACGCG AGCGGCTGAA GCGGGCGGGC GTCCATCCCG CAAGCCTGCC GCTGGCCATC GACATCGATG CCTGGCTGAA GCGTGGTCGG ACGGGTTGGG ACGCTTTCCC CAACACCGGC GGCGCCGGCA AGATCGATGC CGAGGCCGGA CCGCTGGCCG ATGCGCTGAA GCATCCCAAC GTTCGGCTGA TGACCGGCGC GCAGGTGATG CGGTTGGAAA CCGGTGCGGA CGGGCACGAG GTGGTCGCGG CGGTCCTTCG CCGCAACGGG CGCGAAGAGC GCCTGACCGC GCGGCATTTC GCCGTGGCGG CGGGGGCGGT GCAATCGGCG GCGCTGCTGC TGCGCTCGGC CAACGCAGCG CATCCGACCG GCTTGGGCAA CCGCTCGGAC CAGCTTGGCC GGAACTTCAT GAACCACAAC ACCAGCGCGA TGATCACGCT GAACCCGTTT CTGCGGAATG ACTCGGTCTA TCAGAAAACG CTGTTCTTCA ACGATTTCTA CAACGACGAT CCCCAGGTTC ATGCGCCGCT TGGCAATGTG CAGCTTTTGG GACGGATCAC AGGCAACATC CTCAAGGCGC AGGTGCCGGC CATGCCGCGT TTCCTGGCAA GGCTGATGGC CGACCGCGCC TTCGGCTGGT TTCTGACCAG CGAGGACCTG CCCAATCCGA ACAGTCGTGT TCTGGTTCGG GGCGAGAATA TCGTCATGGA CTGGCAGCGC TCCAACATGG ATGCGCATCA CCTGTTGATC AAGCGCGCCA GGCAGGTGAT GAAACGCGCG GGATTCCCGG TGGTGATGGT GCGGATATTC GGCAACAAGA CCACCTCGCA TCAATGCGGC ACCGCGCGCC TCGGTGTCGA TCCGCACAAG TCGGTTGTCG ATCTGGACTG CCGGAGCCAT GACATTCCCA ATCTATGGAT CACCGACGCC TCGATCCTTC CCACTTCGGC CGCGGTAAAC CCGGCCCTGA CGATCGCCGC GCTAGCCCTC AAGGCAGGCG AGGCGATGAA GAATGAGTTA ATCTGA
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Protein sequence | MSTDSDVVII GSGIGGATLA SELAPSGARI LILERGEHLA DTPEARDDMA IFERGFYRSD EEWIGSDGKK FLPGNYYYVG GNSKFYGAVM YRYRVEDFRA RPHLQGTSPG WDMSYDDMEP WYARAEALFK VRGATGQDLT EPPRSGPFPF PPVPDEPALQ LVRERLKRAG VHPASLPLAI DIDAWLKRGR TGWDAFPNTG GAGKIDAEAG PLADALKHPN VRLMTGAQVM RLETGADGHE VVAAVLRRNG REERLTARHF AVAAGAVQSA ALLLRSANAA HPTGLGNRSD QLGRNFMNHN TSAMITLNPF LRNDSVYQKT LFFNDFYNDD PQVHAPLGNV QLLGRITGNI LKAQVPAMPR FLARLMADRA FGWFLTSEDL PNPNSRVLVR GENIVMDWQR SNMDAHHLLI KRARQVMKRA GFPVVMVRIF GNKTTSHQCG TARLGVDPHK SVVDLDCRSH DIPNLWITDA SILPTSAAVN PALTIAALAL KAGEAMKNEL I
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