Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_1075 |
Symbol | |
ID | 4580274 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008686 |
Strand | + |
Start bp | 1049814 |
End bp | 1050566 |
Gene Length | 753 bp |
Protein Length | 250 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639768395 |
Product | ABC transporter related |
Protein accession | YP_914880 |
Protein GI | 119383824 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1126] ABC-type polar amino acid transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACAGCC CCGTTCCCAC GGACCCCGTC ATCAGGCTGA CCGAGGTCAA CAAGCATTAC GGCAATTTCC ACGCGCTGCG CGATGTGAGC CTTGAGGTCG CGAAGGGCGA AAAGATCATC ATCTGCGGCC CCTCGGGTTC GGGAAAGTCG ACGCTGATCC GCTGCATCAA CCGCATCGAG CGGCACGACA GCGGCGAAAT CCTGGTCGAC GGCCACCGCC TGACCGGGGA CACCAAGGAT GTCGCCGCCA TTCGCCGCGA GGTCGGCATG GTTTTTCAGA GCTTCAACCT GTTCCCGCAT ATGACCATCC TGGAAAACTG CACCATCGCC CCGCGCAAGT CGCGCGGCCT GGGCAAGGCC GAGGCGGAAG AGCGCGCCAT GCATTACCTG ACCAAGGTGC GCATTCCCGA CCAGGCCGGA AAATATCCCG GCCAGCTTTC CGGCGGCCAG CAGCAGCGCG TCGCCATCGC GCGGGCGCTG TGCATGCAGC CGCGGGTGAT GCTTTTCGAC GAGCCGACCT CGGCGCTGGA CCCCGAGATG GTCAAGGAGG TGCTCGACAC CATGGTGGAA CTGGCCGAAG AGGGCATGAC CATGCTTTGC GTCACGCATG AGATGGGCTT TGCGCGGCAG GTCGCCGACC GGGTGATCTT CATGGATCGC GGTGAAAAGA TCGAGGAAGC GGCGCCCGGC GCTTTCTTCA CCAACCCGCA AAGCCCGCGC GCGCGTGAGT TCCTGCAACA GGTCATTCAC TGA
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Protein sequence | MNSPVPTDPV IRLTEVNKHY GNFHALRDVS LEVAKGEKII ICGPSGSGKS TLIRCINRIE RHDSGEILVD GHRLTGDTKD VAAIRREVGM VFQSFNLFPH MTILENCTIA PRKSRGLGKA EAEERAMHYL TKVRIPDQAG KYPGQLSGGQ QQRVAIARAL CMQPRVMLFD EPTSALDPEM VKEVLDTMVE LAEEGMTMLC VTHEMGFARQ VADRVIFMDR GEKIEEAAPG AFFTNPQSPR AREFLQQVIH
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