Gene Pden_1068 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_1068 
Symbol 
ID4580267 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp1044336 
End bp1044779 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content65% 
IMG OID639768388 
ProductMarR family transcriptional regulator 
Protein accessionYP_914873 
Protein GI119383817 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAAGG AACCGACCCT CGAAGATCAG CTGTGCTTCT CGCTCTATGC GACCTCCATG 
GCGATCAACC GCCTCTACAA GCCGCTGCTG GACCAGCTGG GCATCACCTA TCCGCAATAC
CTGGTGCTGA ACGTGCTGTG GGAGAAAGAC GGGCGCAGCA TCAGCGCGAT TGCCACCCGG
CTGGACCTGG AGCCGAGCAC GATCACGCCG CTGGTCAAAC GGCTGGAGGC AGCCGGGCTG
GTCACGAGAA CCCGGCGCCA GGATGACGAG CGGGGCGTGG TGGTCGCATT GACCGCGCGC
GGTCTGGATC TCAGGACGGA AAGCCGCAGC CTTGGTGAGG CCCTCTTCGC CCGGGCCGGC
ATGACGGCGG AAGAGATGAT CGCCCTCAAC CGCGAGGTCC GGCGCCTGCA TCAGGCCCTG
ACAGGCAAGG AAAGCACATC GTAA
 
Protein sequence
MAKEPTLEDQ LCFSLYATSM AINRLYKPLL DQLGITYPQY LVLNVLWEKD GRSISAIATR 
LDLEPSTITP LVKRLEAAGL VTRTRRQDDE RGVVVALTAR GLDLRTESRS LGEALFARAG
MTAEEMIALN REVRRLHQAL TGKESTS