Gene Pden_1037 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_1037 
Symbol 
ID4579592 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp1016024 
End bp1017241 
Gene Length1218 bp 
Protein Length405 aa 
Translation table11 
GC content67% 
IMG OID639768359 
Productamidohydrolase 
Protein accessionYP_914844 
Protein GI119383788 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1228] Imidazolonepropionase and related amidohydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.976155 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACGA CCCTTTTGAA GAACGCCAGC ATCCTCGATG TCGATGCCGG CAGCCTGTCC 
GCGACCTGCG ACGTGCTGAT CGCCGAGGGG CGCATCGCCG AGGTCGGCAG CCGCGCCAGG
ACGGCCGAGC GGGTGATCGA CCTGAAGGGC CGGACGCTGA TGCCCGGGCT GTGCGACGCG
CATGTCCATG TCATCGTGCC GATGAACAGC TTCGCGCTGC TGACGAAATG GTCGCCCTTC
TATACCGCGA TCCGGGCCAT GCCGATTCTG CGGGACATGC TGATGCGCGG CTTTACCACC
GTGCGCGATG CGGGCGGCGC CGATTTTGGC CTGGCGCGCG CGGTCGAGGA GGACCTGATC
CCCAGTCCGC GCATCCTCTA TTCCGGCAAG GCGCTGTCGC AATCGGGCGG CCATGGCGAC
ATGCGGGGCC CGGGCGAGAC CGCTTATGAC GACCATTACT ATGTCCCCAG CCTTGGCCGC
ATCTGCAACG GCGTGGCCGA GGTCCGGGCG GCGGCGCGGG ACGAGATCCG GCGCGGCGCG
CATCAGGTCA AGTTGATGGT CGGCGGCGGC ATCGCCTCCT ATACCGACCC GATCCATTAC
GTCCAGTTCT CGCGCGAGGA GATCCGCGCG GCGGTTGAGG AGGCCGAGAA CGCCTCGACC
TATGTCATGG CGCATGCCTA TACCAACCGC TGCATCCGGC ATGCGGTGGA ATGCGGCGTG
CGCTCGATCG AGCACGGCAA TTTCCTGGAC GACGAGACCG CGGCACTGAT GCGCGAGTGC
GGGGCCTATC TGGTGCCGAC GCTCTCGGCC TATACCACCA TGTGGGAGGA AGGCTTGCAG
GTCGGCATGC CGGCCGAGCT TCACGCCAAG ATCAGGCCGG TGCTGGACGC CGGGCCGCGG
CAACTGGAAA TCGCCGCCCG GCATGGCGTG CCCATGGTCT ATGGCACCGA CCTGATCGGG
CCGCTGCACC GCCATCAGTT GCTGGAGTTC CGCATTCGCG GCGAAGTGCT GCCTGCGGCC
GAGGTAATCC GGCAGGCGAC CTGCAACGCC GCGGCGCTGT TCAACATGCA GGACCAGATC
GGCCGGGTGA AGGAGGGGCT GCGCGCCGAC CTGATTGCGC TGCAAGGCAA TCCGCTGGAG
GATCTGGATT TGTTGCAGGC GCCCGAGAAC CTGTCGCTGA TCATGAAGGA CGGCCGCATC
TATCGCGAGG CGGCGTGA
 
Protein sequence
MTTTLLKNAS ILDVDAGSLS ATCDVLIAEG RIAEVGSRAR TAERVIDLKG RTLMPGLCDA 
HVHVIVPMNS FALLTKWSPF YTAIRAMPIL RDMLMRGFTT VRDAGGADFG LARAVEEDLI
PSPRILYSGK ALSQSGGHGD MRGPGETAYD DHYYVPSLGR ICNGVAEVRA AARDEIRRGA
HQVKLMVGGG IASYTDPIHY VQFSREEIRA AVEEAENAST YVMAHAYTNR CIRHAVECGV
RSIEHGNFLD DETAALMREC GAYLVPTLSA YTTMWEEGLQ VGMPAELHAK IRPVLDAGPR
QLEIAARHGV PMVYGTDLIG PLHRHQLLEF RIRGEVLPAA EVIRQATCNA AALFNMQDQI
GRVKEGLRAD LIALQGNPLE DLDLLQAPEN LSLIMKDGRI YREAA