Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_0989 |
Symbol | |
ID | 4578765 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008686 |
Strand | + |
Start bp | 969124 |
End bp | 970461 |
Gene Length | 1338 bp |
Protein Length | 445 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639768311 |
Product | HK97 family phage portal protein |
Protein accession | YP_914796 |
Protein GI | 119383740 |
COG category | [S] Function unknown |
COG ID | [COG4695] Phage-related protein |
TIGRFAM ID | [TIGR01537] phage portal protein, HK97 family |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCCTGT TCACTCGCGC GCTGGCGGCG CCGTTCAAAC TCTATCACTC GGTCGCGGAC GAGGTCGCCA AGGACCGCCG CCTGCGGCTG AGCGATGGCT CGGGCTGGTC GCAGCTGTTC GGCCGGTCAT CCTATGCCGG CAAGACCGTG ACCATGACCA GCGCCATGCA GCTGTCGGCG GTCTGGGCCT GCATCCGGGT CACCGCGCAG GCGATTTCGG CGCTGCCGCT GGGGGTCTAC GAGCGGCGCG GCGACGATGA CAGGGTGCGC GTCGATGACG ATCCGGTCGC CGACGTGCTG ACCGGCAGCC CGAATGCCGA CCAGACGCCG CTGGAGTTCT GGGAAGGGAT GGTCGCATGG CTGGTGACCA GCGGGAACGC CTATGCCGAA AAGGGCTTGA TCGGCAGCCG GCTGACCTCG CTGGAGCCGT TGCAGGCCGG CGGGCTCAAC TGCCGGCCGG TGCGCCTGCC CGATGGACGC CTGGTCTATC GCGTCACCGA CCGGGGCAAG GCCGAAGACC TGCCGCGCGA CAAGGTGCTG CATCTCAAGG GCTTCGGGCA GTCGATTTCG GATCGCGATA CCGGGCTGTC GCCCATCGCC GTCGGCGCGA ACACCATGGG GGCCGCGATG GCGGCGCAGG AGGCATCCTC CAGCGTCTTC GCCAACGGCA TGATGCCGTC GGGCTTCATC CTCTTCGACC AGCAGCTGAC CAAGGATCAG CGCGCGCAGG CCCGCAAGAA CCTGATCGAG CCCCTGCAAG GGTCGGGCAA GACCGGCGCC ATCGGCATCC TCGAAGGTGG CACCCAGTTC CTCCAGACCC AGATGAACCC CGAGGATGTG CAGATGCTCG ACACCCGCCG GTTCGACATC GAGGAGATTT GCCGCTGGTG GGGCGTGCCG CCTATCGTCA TCGGCCATGC CGGGCAGGGC CAGACCATGT GGGGCTCCGG GGTCGAGCAG ATCCTGATCT CCTGGCTGGT TCTGGGCATC AACCCGATCT GCAGCCGGAT CGAGGCGCGC GTGGCCAAGC AGCTGCTGCG GCCGCATTCC TCGCCCCGGC GCTATGCCGA GTTCAACCGC GAGGCGCTGT TGCAGATGGA TTCGACGGCC AAGGCCAATT TCATCTCGCG CATGGTGCAG TCGGCGATCA TGACCCCGGG CGAGGGCCGC GCCAAGCTGA ACCTGCCGCG CAAGGACGGC ACGGATCGGC TTCTGGCCCA GACCAGCCTC GCGCCGCTGG AAACGCTCGG ACAGGACAAG CCGACCGGCC AGCTGCGGCA GGCGCTGCTG AACTTCCTCG GCATAACGGA AAAGGACAAG GGCGATGAGC ATTCGTGA
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Protein sequence | MGLFTRALAA PFKLYHSVAD EVAKDRRLRL SDGSGWSQLF GRSSYAGKTV TMTSAMQLSA VWACIRVTAQ AISALPLGVY ERRGDDDRVR VDDDPVADVL TGSPNADQTP LEFWEGMVAW LVTSGNAYAE KGLIGSRLTS LEPLQAGGLN CRPVRLPDGR LVYRVTDRGK AEDLPRDKVL HLKGFGQSIS DRDTGLSPIA VGANTMGAAM AAQEASSSVF ANGMMPSGFI LFDQQLTKDQ RAQARKNLIE PLQGSGKTGA IGILEGGTQF LQTQMNPEDV QMLDTRRFDI EEICRWWGVP PIVIGHAGQG QTMWGSGVEQ ILISWLVLGI NPICSRIEAR VAKQLLRPHS SPRRYAEFNR EALLQMDSTA KANFISRMVQ SAIMTPGEGR AKLNLPRKDG TDRLLAQTSL APLETLGQDK PTGQLRQALL NFLGITEKDK GDEHS
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