Gene Pden_0938 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_0938 
Symbol 
ID4579412 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp917772 
End bp918974 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content67% 
IMG OID639768259 
Productaminotransferase, class I and II 
Protein accessionYP_914745 
Protein GI119383689 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0436] Aspartate/tyrosine/aromatic aminotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTTTT TGTCGCAGAC GCTCGCCCGC GTCAAACCCT CGCCCACCAT CGCCATCACC 
GGCCGCGCCC GCGAGCTTGC CGCCGAGGGC CGGGACATCA TCAGCCTGTC CGCCGGCGAG
CCCGATTTCG ACACGCCCGC GCATATCCGC GAGGCTGCCA AGGCTGCCAT CGATGCCGGC
CATACCCGCT ATACCGCGGT GGACGGCATC CCCGAACTGA AACGTGCCAT CTGCGACAAG
TTCGCGCAGG AAAACGGGCT GGACTACGGC CCGGCGCAGG TGACGGTCGG CACCGGCGGC
AAGCAGATCC TCTACAACGC GCTGATGGCG ACGCTGAACC CGGGCGACGA GGTGATCATC
CCGGCACCCT ATTGGGTCAG CTACCCGGAC ATGGTGCTGC TGGCCGGCGG CACGCCCGTG
GTGATCGAGG GCGCCATGGC CAACGGCTAT CGCATCACCC CCGAGCAGCT GGAGGCGGCG
ATCACGCCCC GGACGAAATG GGTGATCCTG AATTCGCCCT CGAACCCCAC GGGCGCGGGC
TATGGCGAAG AGCATATGCG CGGGCTGACC GAGGTGCTGA TGCGCCACCC GCATGTCTGG
GTGCTGTCGG ACGACATCTA TGAGCATCTG GTCTTTGACG ATTTCCGCTT CGTCACGCCG
GCGCAGGTCG AGCCGGGGCT GACATCGCGC ACGCTGACCA TGAACGGCGT CAGCAAGGCC
TATGCCATGA CCGGCTGGCG CATCGGCTAT GGCGCCGGAC CCGAGGCGCT GATCCGCGCC
ATGGCCAAGC TGCAATCGCA ATCGACCTCG AATCCCTGCT CGATCAGCCA ATATGCCGCG
CTGGCCGCGT TGCAGGGGCC GCAGGACTAT ATCCAGGAAA GCCGCGCCGT CTTCCAGCGC
CGCCGCGACC TGGTGGTCGA GGGGCTGAAC GCCTGCCCCG GCATCGACTG TCCGGTGCCG
CAGGGCGCTT TCTATGTCTA TCCCTCGATT TCGGCGCTGA TCGGCAAGAC CTCGGCCGGC
GGGGCGGCGA TCGCCGACGA CGAGGCCTTC GCCACCGCGC TTCTGAACGA GACCGGGGTC
GCCGTGGTCT TTGGCGCAGC CTTCGGGCTG TCGCCGCATT TCCGCATCTC CTACGCCACC
TCGGACGCGG TGCTGGCGGA TGCCTGCGCG CGCATCAGGG CGTTCTGCGA AGGGCTGCGT
TGA
 
Protein sequence
MSFLSQTLAR VKPSPTIAIT GRARELAAEG RDIISLSAGE PDFDTPAHIR EAAKAAIDAG 
HTRYTAVDGI PELKRAICDK FAQENGLDYG PAQVTVGTGG KQILYNALMA TLNPGDEVII
PAPYWVSYPD MVLLAGGTPV VIEGAMANGY RITPEQLEAA ITPRTKWVIL NSPSNPTGAG
YGEEHMRGLT EVLMRHPHVW VLSDDIYEHL VFDDFRFVTP AQVEPGLTSR TLTMNGVSKA
YAMTGWRIGY GAGPEALIRA MAKLQSQSTS NPCSISQYAA LAALQGPQDY IQESRAVFQR
RRDLVVEGLN ACPGIDCPVP QGAFYVYPSI SALIGKTSAG GAAIADDEAF ATALLNETGV
AVVFGAAFGL SPHFRISYAT SDAVLADACA RIRAFCEGLR