| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_0931 |
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| Symbol | |
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| ID | 4579405 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | - |
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| Start bp | 910948 |
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| End bp | 912804 |
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| Gene Length | 1857 bp |
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| Protein Length | 618 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639768252 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_914738 |
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| Protein GI | 119383682 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4166] ABC-type oligopeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGATTCT TCAAGTTTGC TAACGAATCC GCGATCTGGC GGCGAATCGC GCTGTGCATG
TGTGTTGCAT CCATGCCGCT GGCAAGCCCC GCCGAACCCA TGCATGCCAT TGCAATGTAT
GGAGAACCTG CGCTGCCGCC CGGCTTCTCC CACCTGCCCT ATGCCAATCC CGACGCACCC
AAGGGCGGCA CGATTCGCCT GGCCGAGACG GGCACCTTCG ATTCGCTCAA CCCCTGGATC
CTGATGGGCA ACCCGGTCTG GCCGATCTTT ACCCAGCCGG GACTTGTGAC CGAGTCGCTG
ATGGCCCGCT CGATCGACGA GCCCTTCACG CTTTACGGCC TGCTGGCCGA AAGCGTCGAG
ACCGATGCGG ATCGCAGCTG GGTCGAGTTC ACCCTGCGCC CCGAGGCGCG CTTTTCGGAC
GGCACCCCCG TCACCGTCGA GGACGTGATG TGGTCCTATG AGGTGCTGGG GACCAAGGGC
CATCCGCGCT ATACCACCGT CTGGTCCAAG GTCGAGAAGA TGGAGCAGAC CGGCCCGCGC
TCGGTCCGCT TCACCTTCAA CACCGCCGAC CGCGAGCTGT CGATGCTGAT GGGCATGCGG
CCGATACTGA AGAAGGCGCA ATGGGACGGG CGCGATTTCA GCCGGTCCAG CCTGATGGTT
CCCATTGGCT CGGGGCCCTA TGTGATCGAC AGGGTCGATC CGGGTCGGGC GATCACCTTT
CGCCGCAACC CGGACTATTG GGGGCGCGAC CTGGGCGTGA CCCGGGGCAT GCATAATTTC
GACGTGATCC GCTATGATTA CTTCGGCGAT GCCTCGGCCA TGTTCGAAGC CTTCAAGGCC
GGCGAGATCG ATGTCTGGCG CGAACTGGTC GCGGCGCGCT GGGACCGCGA CTTCGATTTC
CCCGCCATGC GCGAAGGCCG GATGGTGAAA TCCGAGATCG CGCATGGCCG CCCCTCGGGG
ATCATGGGGA TGGTGATGAA CACCCGCAAT CCGCTGTTCG CCGACTGGCG GGTGCGGCAG
GCGATGATCG AGGCCTTCAA CTATCGCTTC ATCAACATGA CGCTGACCGG CGGCAAGGAT
CCCCGCATCA CCAGCTATTT CGCCAATTCC GAACTTGCGA TGCAGCCCGG CGCGGCCACC
GGGCGCGAGG CCGAATTGCT CGCGCCCTTC GCGGCGGAGC TGCCGCCCGG CACCGTCGAG
GGCTATGCCC TGCCCGAGGG CGGCGAGCGG GCCATCGACC GCAAGGGCAT CCGCGCCGCG
CTGGACCTGC TGGGCGAGGC CGGCTGGACC GTGCAGGGGG GCGAGTTGCG CGATGCCGAT
GGCCGCCCCT TCAGCTTCGA GATCCTGCTG AACCAGTCGG GCAGCGCCAT GCGCACCAGC
GCCGAGATGC GGCAGATCGT CGACATCTTC GTGCAATCGC TGCGCAACCT CGGCATCCGG
CCCACGGTGA CGCTGCTCGA TGCGGCGCAA TATGTCGAGC GGACGAACAA CTACCAGTTC
GACATGACCT GGTATGAGCG CGGCTTGTCG CTGTCGCCGG GCAACGAGCA GCGGCTTTAT
TGGGGGCGCG AGGGCGTGTC CAAGCCGGGC AGCCGCAACT GGATGGGCAT GGACAGCCCC
GCCGCCGAGG CGATGATCGC CGAGATGGGC CAGGCCCGCA CGCATGAGGG TTTCGTCGCC
GCGGTCAGGG CCCTTGACCG GATCTTAACC GCCGGACGCT ATGTCATCCC GGTCAGCTAT
TCACGGATTT CCCGCTTGGC CCATCGCGCC GACCTGGATT ATCCTGAAAA CACGCCGCTT
TACGGTGACT GGCCCGGCTT CATGCCAGAA ACCTGGTGGC AGGAGGAAAG AGAATGA
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| Protein sequence | MRFFKFANES AIWRRIALCM CVASMPLASP AEPMHAIAMY GEPALPPGFS HLPYANPDAP
KGGTIRLAET GTFDSLNPWI LMGNPVWPIF TQPGLVTESL MARSIDEPFT LYGLLAESVE
TDADRSWVEF TLRPEARFSD GTPVTVEDVM WSYEVLGTKG HPRYTTVWSK VEKMEQTGPR
SVRFTFNTAD RELSMLMGMR PILKKAQWDG RDFSRSSLMV PIGSGPYVID RVDPGRAITF
RRNPDYWGRD LGVTRGMHNF DVIRYDYFGD ASAMFEAFKA GEIDVWRELV AARWDRDFDF
PAMREGRMVK SEIAHGRPSG IMGMVMNTRN PLFADWRVRQ AMIEAFNYRF INMTLTGGKD
PRITSYFANS ELAMQPGAAT GREAELLAPF AAELPPGTVE GYALPEGGER AIDRKGIRAA
LDLLGEAGWT VQGGELRDAD GRPFSFEILL NQSGSAMRTS AEMRQIVDIF VQSLRNLGIR
PTVTLLDAAQ YVERTNNYQF DMTWYERGLS LSPGNEQRLY WGREGVSKPG SRNWMGMDSP
AAEAMIAEMG QARTHEGFVA AVRALDRILT AGRYVIPVSY SRISRLAHRA DLDYPENTPL
YGDWPGFMPE TWWQEERE
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