Gene Pden_0918 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_0918 
Symbol 
ID4579067 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp899825 
End bp900592 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content67% 
IMG OID639768239 
Productalpha/beta hydrolase fold 
Protein accessionYP_914725 
Protein GI119383669 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.891406 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.241554 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCTGA ACATGAACGT GACAGGAACA GATTCGGGTC AGCCGCCGGT TTTGCTGGCG 
CATGGGCTGT TCGGGTCGGG ACGCAATCTG GGCGGCCTCG CCCGGCGGCT GGGCGAAAGC
CGGCGCGTGA TCTCGGTCGA CATGCGCAAC CATGGCGACA GCTTCCACGA CCCCGATCAC
AGCTATGCGG CGCTGGCCGG CGATCTGGCC GAGGTGATCG CCGCAGAAGG CGGCCGGGCC
GATGTGCTGG GCCATTCGAT GGGCGGCAAG GCAGCGATGA CCTTGGCGCT GACGCGGCCG
GAAACGGTGC GCCGTCTCGT GGTCATGGAC ATCGCGCCCT ATGCCTATGG CCATAGCCAG
AGCAGCCATA TCGACGCGAT GGAGGCCGTG GACCTTGCCG GCCTTCGCCT GCGCTCGGAA
GCCGACGCGC GGCTGGCCGA ACATGTCGCC GATCCGGGCG TGCGCGCCTT TCTGCTGCAA
TCGCTGGACC TGAAGGCCGA TCCGCCGCGC TGGAAGTTCA ACCTGACCGC GTTGCGCGAC
CAGATGCCCC AACTGGTCGG CTGGCCGGAG ACGCCCAAGG GCAGCTTTGC CGGCCCCGTG
CTGTTCCTGG CCGGAGAAGA CTCCGACTAT TGCCGCAAAC CGCAGGTCGA GGCGATCCGC
GAGCATTTCC CCCAGGCCGA GATCCGCGTC ATCCCCGGCG CGGGACATTG GCTGCATGCC
GATCGCCCGG CCGAGGTCGC CGAAGTGGTG GCCGCATTCC TCGGCTGA
 
Protein sequence
MMLNMNVTGT DSGQPPVLLA HGLFGSGRNL GGLARRLGES RRVISVDMRN HGDSFHDPDH 
SYAALAGDLA EVIAAEGGRA DVLGHSMGGK AAMTLALTRP ETVRRLVVMD IAPYAYGHSQ
SSHIDAMEAV DLAGLRLRSE ADARLAEHVA DPGVRAFLLQ SLDLKADPPR WKFNLTALRD
QMPQLVGWPE TPKGSFAGPV LFLAGEDSDY CRKPQVEAIR EHFPQAEIRV IPGAGHWLHA
DRPAEVAEVV AAFLG