Gene Pden_0899 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_0899 
Symbol 
ID4578577 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp882066 
End bp883337 
Gene Length1272 bp 
Protein Length423 aa 
Translation table11 
GC content69% 
IMG OID639768219 
ProductPpiC-type peptidyl-prolyl cis-trans isomerase 
Protein accessionYP_914706 
Protein GI119383650 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0760] Parvulin-like peptidyl-prolyl isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.408159 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.561941 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGCGAA TTCTTCTGGG GGCGGCCATG GCCGCGATGC TGGCAGCAGG CGGGGTTGCC 
CCGGCCTTTG CACAGGGCAA TCCGTTCCAG CCGCTGGTCT ATGTCAACGA TTCGGTCGTC
ACCCGATACG AGCTGGACCA GCGCATGCGC TTCCTGCAGA TCCTGCGCGC GCCCGATGGC
GACCGCGCCT CGGCCGAGCA GGCGCTGATC GACGACCGCT TGCGCCTCTT TGCCGCGCGC
CAGATGGGCA TTGCCGCCAG CGACGCCCAG ATCGATGCCG GCCTGGCCGA ATTCGCCGGC
CGCGCCAACA TGGATGTCGA GGAATTTACC CGTGCGCTGG CCCAGGCCGG GGTCGAACAG
CAGACCTTCC GCGACTTCAT CGCCGCCGGC GTGGTCTGGC GCGAACTGGT GCGCCAGCGC
CTCGTGCCGC AGGTCCAGGT CAGCGACGCC GAACTGGACC AGGAGATGCA GCGGGTGATC
GAGACGCCGC GCATCACCCA TGTCGCCCTG TCCGAACTGA TCATTCCCGC CCCGCCCGGC
CAGGAGGCGC AGGCCATGCG CCTTGCGGAA TCGCTGGTGC AGAGCGTACG TTCCGAGGCG
GATTTCGCGG CCGCGGCGCG GCAGCATTCG GCGACTCCCT CGGCCGAGAA CGGCGGCCGC
CTGCCCTGGG CGCCGCTTGA GAACCTGCCG CCCTCGCTGC GGCCGATCAT CCTGTCGATG
CAGAACGGCC AGATCAGCCA GCCCCTGACG GTCGAGGGCG CAGTGGTGCT GTTCTATCTG
CGCGACAGCC GCGGCACGCT GCGGCCGGGC GCCAAGGAGC AGGTGCTCGA CTATGTGCGC
TTTCGCCTGG CCAGCACCGC CGAGGCGAAC CGGATCGCCG CACTTTCTGA CACATGCGCC
GATCTTTTCG TGCATGCCCG CAACCTGCCG CCCGAGCAGA TCCAGCGCCA GACCCTGTCG
CAGGGCCAGA TCCCGACCGC CGAGGCGATC CGGCTGGCGG TGCTGGACGA CAACGAATCG
ACCATCGTCA GCCAGGGCGG CTCGGCCGAG ATCCTGATGC TGTGCAAGCG CCAGTCCGCA
CTGCTGGCAG GCAATGCGCA AGAGGCGCCG GTGCCGGTGA CCGCCGAAGG CGAAGAGGGT
GCTGCGCCCG ATCCCGATGC GCTGCCCGAC CGCGAGCAGA TGCGCGGCCA GATCTTCAGC
CGCAAGGTCG GGCAGGCGGC CGACAACTAC CTGGCCGAGT TGCGCGCCAA TGCGATCATC
CGCCGGCCGT AA
 
Protein sequence
MRRILLGAAM AAMLAAGGVA PAFAQGNPFQ PLVYVNDSVV TRYELDQRMR FLQILRAPDG 
DRASAEQALI DDRLRLFAAR QMGIAASDAQ IDAGLAEFAG RANMDVEEFT RALAQAGVEQ
QTFRDFIAAG VVWRELVRQR LVPQVQVSDA ELDQEMQRVI ETPRITHVAL SELIIPAPPG
QEAQAMRLAE SLVQSVRSEA DFAAAARQHS ATPSAENGGR LPWAPLENLP PSLRPIILSM
QNGQISQPLT VEGAVVLFYL RDSRGTLRPG AKEQVLDYVR FRLASTAEAN RIAALSDTCA
DLFVHARNLP PEQIQRQTLS QGQIPTAEAI RLAVLDDNES TIVSQGGSAE ILMLCKRQSA
LLAGNAQEAP VPVTAEGEEG AAPDPDALPD REQMRGQIFS RKVGQAADNY LAELRANAII
RRP