| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_0897 |
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| Symbol | ksgA |
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| ID | 4578575 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | - |
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| Start bp | 880185 |
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| End bp | 881033 |
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| Gene Length | 849 bp |
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| Protein Length | 282 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 639768217 |
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| Product | dimethyladenosine transferase |
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| Protein accession | YP_914704 |
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| Protein GI | 119383648 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0030] Dimethyladenosine transferase (rRNA methylation) |
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| TIGRFAM ID | [TIGR00755] dimethyladenosine transferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.00367265 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.802625 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGCCA TCGACGGGCT GCCGCCGCTG CGCGAGGTGA TCGCGCGCCA CGACCTGCGC
GCCAAGAAGC AATTGGGGCA GAACTTTCTG CTGGACCTGA ACCTGACCGC CAAGATCGCC
CGTGCCGCCG GCGACCTGAC GGGCTGCGAC GTGATCGAGG TCGGGCCGGG TCCGGGCGGC
TTGACCCGCG GGTTGCTGGC CGAGGGCGCG CGCCATGTGC TGGCCATCGA AAAGGATGCC
CGCGCCCTGC CCGCCTTGGC CGAGATCGCC ACGGCCTATC CCGGCCGGCT GGAGGTGATC
CATGGCGACG CGCTGGAGAT CGACCCGCTG GCGCATCTGA CGCCGCCGAT CCGCATCGTG
GCGAACCTGC CCTACAATGT CGGCACTGAG TTGCTGATCC GTTGGCTGAC CCCTGCCGCC
TGGCCGCCCT TCTGGCAATC GCTGACGCTG ATGTTCCAGA AGGAAGTGGC CGAGCGCATC
GTGGCCCAGC CGGGCGGCAA AGCCTATGGC CGGCTCGCCG TGCTGGCGCA GTGGCGCACC
GAGGCGCGGA TCGTGATGAC CCTGCCGCCC GAAGCCTTCG TGCCGGCGCC CAAGGTGCAT
TCGGCGGTGG TGCATCTGAC CGCCCTGCCC GGGCCGCGCT ACCCGGCCGA TCCGGCGGTC
TTGAATCGCG TCGTGGCAGC GGGGTTCAAC CAGCGCCGCA AGATGCTGCG CGCCTCGCTG
AAGGGCCTGC ACCCGGAGAT CGAGGCGCTG CTGATCCAGG CCGGCATCGC CCCCACCGCC
CGGGCCGAGG AAATCGGGCT GGAGCAGTTC TGCGCGCTGG CGCGGGGCCT GGCCGCCGCG
CCGCGCTGA
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| Protein sequence | MSAIDGLPPL REVIARHDLR AKKQLGQNFL LDLNLTAKIA RAAGDLTGCD VIEVGPGPGG
LTRGLLAEGA RHVLAIEKDA RALPALAEIA TAYPGRLEVI HGDALEIDPL AHLTPPIRIV
ANLPYNVGTE LLIRWLTPAA WPPFWQSLTL MFQKEVAERI VAQPGGKAYG RLAVLAQWRT
EARIVMTLPP EAFVPAPKVH SAVVHLTALP GPRYPADPAV LNRVVAAGFN QRRKMLRASL
KGLHPEIEAL LIQAGIAPTA RAEEIGLEQF CALARGLAAA PR
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