Gene Pden_0866 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_0866 
Symbol 
ID4578662 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp855006 
End bp856037 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content70% 
IMG OID639768185 
Productperiplasmic binding protein 
Protein accessionYP_914673 
Protein GI119383617 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCCGC TTTCCCGCCG CCTTCTTGTC GGCGCCTTGC TGGCGGCGGC ATTCGCCCTG 
CCCGCACCGG CCTTCGAAGG ACGGACCGTC ACCGACGCCA CGGGTCGCAC GGTGCAGATC
CCCGCCGATC CGGCGCGGGT CTTTGCCGCC GGCCCCCCGG CCGCGGTGCT GCTCTATGCC
CTGAAGCCCG AGGCGATGGT CGGCTGGGTC AGCGCCCCCA AGCCCGAGGC GCTGCCCTTC
CTGCGCCCCG ACGCGGCCGG CCTGCCCGAG CTGGGCCGGT TGACCGGCAG GGGCGATACG
CTGAACCTCG AGGTCCTGCT GTCCTCCGGC CCCGACCTGA TCGTCGATTA CGGAACCGTC
AACGACACCT ATATCGACCT TGCCGCCCGC ATCCAGGACC AGTTGGGCCT GCCCTATGCC
CTGATCGACG GCAGCTTCGC GCATATGCCG CAGGGGATCC GAGAGATGGC CGGCATCCTC
GGCGTGCCCG GGCGCGGCGA GGAACTGGCG GCCTATGCCG AAGGAACCCT TGCCGATCTC
GACGCCCTTC TGGCCGGGAT ACCGGAGCAG GACCGCCCGA CTGTCTATCT GGCGCGCGGC
CCCGAAGGGC TGGAGACCCC TGCCAGGGGC TCGATCAATG CCGAGATCAT CGAGCGGGTC
GGCGCCCGCA ACCTGGCCGA GGCCGAAACC CGCGGCCTTG CCACCGTGTC GCCCGAACAG
GTCCAGGCCT GGGCGCCCGA GGTCATCATC ACCATCGACC GGGATTTTGC CGCCAATGTC
GGGCGGATGC CGGAATGGCA GGGCATCCCG GCGGTGGCGA ACGGCCGGGT CTACCTGGCG
CCCGCGGCGC CCTTCGGCTT CATCGACGCG CCGCCCTCGG TCAACCGGCT GGCGGGACTG
GTCTGGCTGT CGCACAAGCT TTATCCCACC GCCGCGACAG GCGACCTGCG CGCCGAGATC
GCCGATTTCT ACGACCTCTT CTATGGCATG CGCCCCGACG AGGCTGCGCT GACGGGCCTG
CTGGGTGAGT GA
 
Protein sequence
MMPLSRRLLV GALLAAAFAL PAPAFEGRTV TDATGRTVQI PADPARVFAA GPPAAVLLYA 
LKPEAMVGWV SAPKPEALPF LRPDAAGLPE LGRLTGRGDT LNLEVLLSSG PDLIVDYGTV
NDTYIDLAAR IQDQLGLPYA LIDGSFAHMP QGIREMAGIL GVPGRGEELA AYAEGTLADL
DALLAGIPEQ DRPTVYLARG PEGLETPARG SINAEIIERV GARNLAEAET RGLATVSPEQ
VQAWAPEVII TIDRDFAANV GRMPEWQGIP AVANGRVYLA PAAPFGFIDA PPSVNRLAGL
VWLSHKLYPT AATGDLRAEI ADFYDLFYGM RPDEAALTGL LGE