| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_0851 |
|---|
| Symbol | |
|---|
| ID | 4578648 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008686 |
|---|
| Strand | + |
|---|
| Start bp | 839444 |
|---|
| End bp | 840040 |
|---|
| Gene Length | 597 bp |
|---|
| Protein Length | 198 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639768170 |
|---|
| Product | nicotinamidase |
|---|
| Protein accession | YP_914659 |
|---|
| Protein GI | 119383603 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG1335] Amidases related to nicotinamidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.908349 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCAAGG CCCTGATCGT CATCGACATG CAACTGGATT TCTGCCCGGG CGGGCGGCTT
GCCGTGGCCG GCGGGGACGA GATCGTCGCC GCGATCAACG ACCTGATGGC GGATTTCGAC
GCCGTGGTGC TGACGCAGGA CTGGCACCCC CACGACCATG CCAGCTTTGC CGACAACCAT
CCCGGCGCGG CGGCATTTTC GGTCGTGGAC ATGCCCTACG GGCCGCAGGT GCTCTGGCCC
GCGCATTGCG TGATCGGGAC CGATGGCGCG GGCTTTCACC CGACGCTGGC CGCCGATTGC
GCCGATCTGG TGATCCGCAA GGGTTTTCGC CCGCATATCG ACAGCTATTC CGCGTTTTTC
GAGAACGATC ACCGCACCCC CACCGGCCTA GCCGGATACT TGCGCGACCG CGGCATGGAC
GACCTGACCT TTGTCGGGCT GGCGCATGAT TTCTGCGTCG CCTGGTCGGC CATCGATGCG
GCGAAGCTGG GTTTCCGCGC CACCGTGATC GAGGACGCCA CCCGCGCCAT CGACCTGAAC
GGCTCGCGCG AGGCGGCGCG CGAGGACATG CGCAAGGCGG GGGTAACACT GGCATGA
|
|---|
| Protein sequence | MAKALIVIDM QLDFCPGGRL AVAGGDEIVA AINDLMADFD AVVLTQDWHP HDHASFADNH
PGAAAFSVVD MPYGPQVLWP AHCVIGTDGA GFHPTLAADC ADLVIRKGFR PHIDSYSAFF
ENDHRTPTGL AGYLRDRGMD DLTFVGLAHD FCVAWSAIDA AKLGFRATVI EDATRAIDLN
GSREAAREDM RKAGVTLA
|
|---|
| |