Gene Pden_0834 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_0834 
Symbol 
ID4579449 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp812160 
End bp812933 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content71% 
IMG OID639768153 
ProductWecB/TagA/CpsF family glycosyl transferase 
Protein accessionYP_914642 
Protein GI119383586 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1922] Teichoic acid biosynthesis proteins 
TIGRFAM ID[TIGR00696] bacterial polymer biosynthesis proteins, WecB/TagA/CpsF family 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATTTCA GCTTTCCCGA CGGCAATGCC GTCCGCATCA ATTGCCGGGA TTCTTCCGCG 
CTGCTTGCCG CCGTGCGACA GAGACTGGCG GACGGGCGCG GCTTCGCCAT CGCCACGATC
AACGTCGACC ACCTGCAAAG GCTGGGCGAG GATGCCCGCT TTCGCAGCGC CTATGCCGCA
CATGACCTGG TCTGCGCCGA CGGCAATCCC ATCGTCTGGC TGTCGCGGAT CGCCGGCCGG
CCCGTGGCGC TGGCACCCGG CTCGGACCTG GTGCTGCCGC TCGCCGCCGA GGCGGCGCGG
GCCGGCCTGC CTGTGGCGCT GATCGGCAGC AGCGACGAAT CGCTGGCCCT TGCCGCGCAA
AGCATGCAGG CGGCGGTGCC CGGGCTGCGG GTCGCGCTGA CCCATGCGCC GGGCTTTCCC
TTCGACCCGA TGGGCGAGGA AGGGGCCGAG ATCATCGCCC GCATCCGCGC CTCGGGCGCG
CGGCTGTGCT TCCTGGCGCT TGGCGCTCCG CGGCAGGAAC TGTTCGCCAT CCGCGCCCGC
GATGCGCTTG GCGACGTGGG CTTCGCCTCG ATCGGGGCCG GGCTCGACTT TCTTTCGGGC
CATCAGCGCC GGGCGCCGCA GCTCATGCGC CGGCTGAAGC TGGAATGGCT GTGGCGGATG
CTGTCCAATC CACGCCGGCT GTTCGTGCGC TATGCCAAAG GCTTCGCCAT CCTGCCCGGC
CATCTGCGCC GGGCGCTGGC GCTGCGCGCC GGAAACGACG AGGCGCCCAG ATAA
 
Protein sequence
MHFSFPDGNA VRINCRDSSA LLAAVRQRLA DGRGFAIATI NVDHLQRLGE DARFRSAYAA 
HDLVCADGNP IVWLSRIAGR PVALAPGSDL VLPLAAEAAR AGLPVALIGS SDESLALAAQ
SMQAAVPGLR VALTHAPGFP FDPMGEEGAE IIARIRASGA RLCFLALGAP RQELFAIRAR
DALGDVGFAS IGAGLDFLSG HQRRAPQLMR RLKLEWLWRM LSNPRRLFVR YAKGFAILPG
HLRRALALRA GNDEAPR