Gene Pden_0825 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_0825 
Symbol 
ID4580571 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp800699 
End bp801505 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content72% 
IMG OID639768144 
Producttransglutaminase domain-containing protein 
Protein accessionYP_914633 
Protein GI119383577 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1305] Transglutaminase-like enzymes, putative cysteine proteases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.504706 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGCTGA AGATCACCCA CGAGACCAGC TATTGCTACG ATCCGCCGGC GCAGGGACTG 
GTGCAGAGCC TGCGGCTGAC GCCCTCGGTC CATGAGGGGC AGCGGGTCGC GGACTGGACG
ATTTCGGTCA GCGGCGGCCA GCGCGGCGCC GCATTTCGCG ACGGTGCCGG CGACTGGATC
GAGGGCTGGA GCGTGCGCGG CCCGGTGCAG GAGATCGTGG TCTCGATCGC TGGCCAGGTC
GAGACCCGCG ACACCGCCGG CGTGCTGCGC GGCCACCGCG AGACGGTGAA TCCGCTGGTC
TATCTGCGCC CGACGGCGGC GACCCGGATC GACGCGGCGT TGCGCGACCT TGCCCTTTCC
GAACAGGGCG AGGACGGGCT GGACCTTGCG CACCGGCTGG CCGCGGCCGT CGCAAGGGCC
ATCGCCTATG AGCCGGGCGT GACCGAGGCG CATACCACCG CCGCCGAGGC CCTGGCGCTG
GGGCAGGGGG TCTGCCAGGA CCATGCCCAT GCGCTGATCG CCTGCGCCCG CGAACGCGGC
CTGCCGGCGC GCTATGTCTC GGGCTATCTG CATTCCAATG CCGGGGGCGA GCCGCATGAC
GCCGCCCATG CCTGGGCCGA GATCCATGTC GGCTCCCTCG GCTGGGTCGG CTTCGACGCC
GCGAATGCCT GCTGCCCGGA CGACCGCTAT GTCCGGCTGG GCTCGGGGCT GGACGCGGAC
GATGCGGCGC CGGTGCGCGG CACCACCTTC GGCTCGGGCG AGGAAAGCCT GGACGTGCGG
GTGCAGGTCG AGGAGATGGA GCAGTAA
 
Protein sequence
MRLKITHETS YCYDPPAQGL VQSLRLTPSV HEGQRVADWT ISVSGGQRGA AFRDGAGDWI 
EGWSVRGPVQ EIVVSIAGQV ETRDTAGVLR GHRETVNPLV YLRPTAATRI DAALRDLALS
EQGEDGLDLA HRLAAAVARA IAYEPGVTEA HTTAAEALAL GQGVCQDHAH ALIACARERG
LPARYVSGYL HSNAGGEPHD AAHAWAEIHV GSLGWVGFDA ANACCPDDRY VRLGSGLDAD
DAAPVRGTTF GSGEESLDVR VQVEEMEQ