Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_0822 |
Symbol | |
ID | 4580568 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008686 |
Strand | + |
Start bp | 795629 |
End bp | 798091 |
Gene Length | 2463 bp |
Protein Length | 820 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639768141 |
Product | peptidase domain-containing protein |
Protein accession | YP_914630 |
Protein GI | 119383574 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG2931] RTX toxins and related Ca2+-binding proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGCTCA CGGGCAGAAA CCTGACCTTT GCCGATGCCG CCGGCACGAC CCTGCACGAG ACGGCCGCGG TCGCCCGCGC GGTCCGCACC GAGGGCGGCG ATGCGCCGGC GGGGCGCTCG ACCGGCTATG CGATGGCGGT GGGGGACACG TTCAACGGCA CCCTGAGCGC GGGCGACAGG GATTGGGTGC GCGTTGAGTT GCAACCGGGC AGCTATGTCA TCACGCTGGA TTCGCGCGGC GCGGCCGGCG TCTACGATCC GTATTTGCGG GTCATGGACG ACGATGGCGT GCAGGTCGCC CAGAACGACG ACGGCGACGG GCTGAACTCG CGCCTGGTGC TGAACGTGGC CCAGCCCGGC ACCTATTACT TGGAGGCGGG CAGCTATGCC GGGCTTTACT CGGGCGCCTA CAGCCTGAAT CTGGCGGCGA CGGGGCCGAC GCACCACTTC ACCATGGCCG AGATCGCCCT GCAACTGACC GACGGCTACT GGGAGGCGAC CGGGCGGTCG CGCCGCGCCT TCGATGTCGG GCAGGGCGAT GTGCTGAACG TGGACCTGTC GGGGCTGACG CAGGAGGGGC GGCAATTGGC CGGCATGGCG CTGTCGGCCT GGGCGCAGGT GACGGGCATC GTCTTCAACC GCAATCCCGG GACGAACGCG ACCATCCACA TCACCTTCGA CGACAGCGAC TGGGGGGCTT GGTCCTCGTC GATGACCAGC GGCGACCGCA TCGTCAGCTC GCATGTGAAT ATCGGGCTGG ACTGGCTGAT CAGCTATGGC ACGGGCTACA ACAGCTACAG CTATCAGACC TATATCCACG AGATCGGCCA TGCCCTGGGG CTGGGTCATG CGGGGAACTA CAACGGCAGC GCCGTCCTGG GGGTGAACAA CCACTATCTG AACGACAGCT GGCAGGCATC GGTGATGTCC TATTTCGACC AGGCGGAGAA TGTCTGGGTC GATGCCAGCT TTGCCTATAT CGCCTCGCCC ATGACCGCCG ACATCCTGGC GATCCAGCGG CTTTACGGTC CGACCGCGAT CCGCACCGGC AACAACACCT ATGGCGAAAC CACCAATGCC GGGCCAAGCT ATGCCACCAT CGCGGCGCTG CTGCGCAATG CGGATACGCG GGACGACATC GCCTTTACCA TCTTCGACCA GGGCGGCGTG GACATGCTGG ACCTGGGCAC CGACACGCGT GGCCAGCGCA TTTCGCTGGT GGCGGGGACG TCGTCCAACG CCTATGGGCT GGTGGGCAAT ATCTCGATCA TGCCCGGCAC GCTGATCGAG AACGCGCAGG CCGGCCGCGG CAACGATCTG GTCATCGGCA ACTGGGCCGA CAATATCCTG CGCGGCGGCG CCGGCAACGA CACGCTTCGT GGTGCGGCGG GCAATGACAC GCTGAACGGC CAGGGCGGCG CCGACCGACT TGTGGGTGGT GTGGGCGACG ACGTCTATGT CACCGATGGC CGGGACCAGA TCGTCGAGGC GGCGGGGCAG GGCATCGATA CGGTGCGTTC TACCGTCACC CTGCAACTGG GTGCCAATCT GGAGAATCTG GTGCTGATCT CGAACGCGGC GCAGGACGGC GGCGGCAATG CGCTGGCCAA CCGGCTGACC GGCAATGCCC ATGCCAACCG GCTGGAGGGC TTTTCCGGCA ACGACACGCT GCTGGGCGGT CAGGGCAACG ACACGCTGTA TGGCGGCAAC GGCTGGGACG TGTTGGGCGG CGGCGCCGGG GCCGACCTGC TGATCGGCGG CAACGGCAAC GACATCCTGC GCGGCTGGAC CGGCAACGAC ACATTGCGCG GAGGGGCCGG CAATGACACG CTGAACGGCC AGGGCGGTGC CGACCGGCTT GAGGGCGGCG CGGGCGACGA CGTCTATGTC ACCGATGGCC GGGACCAGAT CGTCGAGGCG GCGGGGCAGG GCATCGATAC CGTGCGTTCT ACCGTCACCC TGCGGCTGGG CGCCAATCTG GAGAACCTGG TGCTGATCTC GAACGCGGCG CAGGACGGCA GCGGCAATGG GCTGGCCAAC CGGCTGACCG GCAATGCCCA TGCCAACCGG CTGGAGGGCT TTTTCGGCAA CGACACGCTG CTGGGCCGTC AGGGCAACGA TCTGCTGTTT GGCGGCCAGG GCGACGACTG GCTGGAGGGT GGCGCCGGTG CCGACCTGCT GGTCGGCGGC CAGGGCGACG ATACCATGCT GGGCGGGGCC GGGGCCGATC ATTTCGTCTT TCAGGGCGGC CGGGACGTCG TGGGCGATTT TCAGGACGAT CTGGATACGC TTCGCATCGA CGACGCGCTT TGGGGCGGCG GCCCGCGCAG CGTGGCGCAG GTCCTGCAAC TCGCCCATGT TGCGGGCGGC AATACCGTCT TCGATTTCGG CAACGGCAAT GTGCTTACGC TGAACGGGTT TGCCAATATC GCCGCGTTGC AGGACGACCT GATCATCGTC TGA
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Protein sequence | MTLTGRNLTF ADAAGTTLHE TAAVARAVRT EGGDAPAGRS TGYAMAVGDT FNGTLSAGDR DWVRVELQPG SYVITLDSRG AAGVYDPYLR VMDDDGVQVA QNDDGDGLNS RLVLNVAQPG TYYLEAGSYA GLYSGAYSLN LAATGPTHHF TMAEIALQLT DGYWEATGRS RRAFDVGQGD VLNVDLSGLT QEGRQLAGMA LSAWAQVTGI VFNRNPGTNA TIHITFDDSD WGAWSSSMTS GDRIVSSHVN IGLDWLISYG TGYNSYSYQT YIHEIGHALG LGHAGNYNGS AVLGVNNHYL NDSWQASVMS YFDQAENVWV DASFAYIASP MTADILAIQR LYGPTAIRTG NNTYGETTNA GPSYATIAAL LRNADTRDDI AFTIFDQGGV DMLDLGTDTR GQRISLVAGT SSNAYGLVGN ISIMPGTLIE NAQAGRGNDL VIGNWADNIL RGGAGNDTLR GAAGNDTLNG QGGADRLVGG VGDDVYVTDG RDQIVEAAGQ GIDTVRSTVT LQLGANLENL VLISNAAQDG GGNALANRLT GNAHANRLEG FSGNDTLLGG QGNDTLYGGN GWDVLGGGAG ADLLIGGNGN DILRGWTGND TLRGGAGNDT LNGQGGADRL EGGAGDDVYV TDGRDQIVEA AGQGIDTVRS TVTLRLGANL ENLVLISNAA QDGSGNGLAN RLTGNAHANR LEGFFGNDTL LGRQGNDLLF GGQGDDWLEG GAGADLLVGG QGDDTMLGGA GADHFVFQGG RDVVGDFQDD LDTLRIDDAL WGGGPRSVAQ VLQLAHVAGG NTVFDFGNGN VLTLNGFANI AALQDDLIIV
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