Gene Pden_0799 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_0799 
Symbol 
ID4580623 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp772881 
End bp773906 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content65% 
IMG OID639768118 
Productcitrate (pro-3S)-lyase 
Protein accessionYP_914607 
Protein GI119383551 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2301] Citrate lyase beta subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.105286 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.561941 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGGCGC AGCAATTATC TATCAGTTTC GCAGCGCCGT TTGAAACATC CTTACCCGAA 
AGGCAAGCCA TGTCCTTCCG CACGCAACCT CCTGCGCCCG CCCGCCTGAA CCGCTGCCAG
CTTTTCGGCC CCGGTTCTCG CGATGCGCTG TTCGAAAAGA TGGCCGGTTC GGCCGCCGAC
GTCATCAACC TGGATCTTGA GGATTCGGTG GCGCCCGACG ACAAGGCGCA GGCGCGCAGG
AACGTGATCC AGGCCATCGG CGACATCGAC TGGGGCGCCA AGACGCTGTC GGTCAGGATC
AACGGGCTGG ACACGCCCTA TTGGTATCGC GACGTGGTGG ACCTGCTGGA ACAGGCCGGC
GAGCGGCTGG ACCAGATCAT GATCCCCAAG GTCGGCAACG CCGCGGACGT CTATGCCGTG
GATGCGCTGG TCACCGCCAT CGAGGCGGCC AAGGGGCGGT CCAAGCGCAT CAGCCTGGAG
GTGATCATCG AATCCGCCGC CGGTATCGCC CATGTCGAAG AGATCGCGGC CGCCTCGCCC
CGGTTGCAGG CGATGAGCCT GGGCGCGGCG GATTTTGCCG CCAGCATGGG CATGGCTACC
ACGGGCATCG GCGGCACCCA GGAAAACTAC TACATGCTGC ACGAGGGGGC GAAATACTGG
TCCGACCCCT GGCATTGGGC GCAGACCGCC ATCGTCGCCG CCTGCCGCAC CCATGGCGTG
CTGCCGGTCG ACGGCCCCTT CGGCGATTTC AGCGATGACG AGGGTTTCCG CGCGCAGGCC
CGCCGCTCGG CCACGCTGGG CATGGTCGGG AAATGGGCGA TCCATCCCAA GCAGGTGGCG
CTGGCCAACG AGGTCTTCTC GCCCAGCGAA AAGGCCGTGA CCGAGGCGCG TGAGATCCTG
GCCGCGATGG AGGAAGCCAA GCGGACCGGC GCAGGCGCGA CGGTATACAA AGGTAGACTG
GTTGACATAG CGTCCATCCG TCAGGCACAA GTGATCGTGC GTCAGGCAGA GTTGATCGGG
GCCTGA
 
Protein sequence
MQAQQLSISF AAPFETSLPE RQAMSFRTQP PAPARLNRCQ LFGPGSRDAL FEKMAGSAAD 
VINLDLEDSV APDDKAQARR NVIQAIGDID WGAKTLSVRI NGLDTPYWYR DVVDLLEQAG
ERLDQIMIPK VGNAADVYAV DALVTAIEAA KGRSKRISLE VIIESAAGIA HVEEIAAASP
RLQAMSLGAA DFAASMGMAT TGIGGTQENY YMLHEGAKYW SDPWHWAQTA IVAACRTHGV
LPVDGPFGDF SDDEGFRAQA RRSATLGMVG KWAIHPKQVA LANEVFSPSE KAVTEAREIL
AAMEEAKRTG AGATVYKGRL VDIASIRQAQ VIVRQAELIG A