Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_0794 |
Symbol | |
ID | 4580618 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008686 |
Strand | + |
Start bp | 767355 |
End bp | 768608 |
Gene Length | 1254 bp |
Protein Length | 417 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639768113 |
Product | polar amino acid ABC transporter, inner membrane subunit |
Protein accession | YP_914602 |
Protein GI | 119383546 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4597] ABC-type amino acid transport system, permease component |
TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.138757 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTCACCT ATACGGGGGC GGACAATCCG CCGTTCCGGT TGTCGATGCT GATCTATGAT CGGCGCTACC GCTCGCTGAC CCTGCAAGCC ATCGTCTTCA TCCTGGTGAT GCTGGCGGCG AGTTGGCTGA TCGACAACAC GCTGCGCAAC CTGTCCGCCA TGGGCAAGAC GCTCAGCTTC GATTTCCTTT TCCGCCGCGC GGGATACGAC ATCCCGCAGC AGCTTATCCC ATACAATTCC GACGACACCC ATCTGCGCGC TACCGTGATC GGGCTGCTGA ACACGCTGCT GGTCTCGATC CTGGGCTGTA TCGCCGCGAC GATCCTGGGC GTGATCGTGG GCGTGCTGCG GCTGTCCTCG AACTGGCTGA TCGCGCGGCT GATGACGGTC TATGTCGAGG TCTTCCGCAA CATCCCCCTG CTGTTGTGGA TCCTGGTCTG CCTTGCGATC TTTACCGAGG TCATGCCGCC GCCCAACGCC TATCGCGGCG AGAATCCGGC GGCGAACATG ATCCTGTTCG ACATGATCGC ACCCACGAAC CGCTATACCG CCATCCCCTC GATCGGCATG ACCAACCCGC CCGGCACCAT CTCGCTGGGG CGCGAGGGGA TCAGCTGGGC GTTCATCGCC TTTGCCGTGG TCATCGCCGC CGCCTGGACC GGCTGGCGCG TGCTGCGCAA CTGGGCGCAG CGGGTGCAGG ACCGGACCGG CAAGCGGCCG CGGACCTGGT GGATCAGCCT GGCGATGTTC GTCGTCCCGG TGCTGTTCCT GACCTGGTAT TTCGGCCTGC ATCTGGTTCC GCCGGTGCTG CGCGGCTTCA ACTTCGCCGA CGGCATCAAC CTCGACAACG CCTTCGTGGT GCTGTGGCTG GCACTGACGC TCTATACCGG CGCCTTCATC GCCGAGATCG TGCGCGCCGG TATCCTGGCC GTCAGCCGCG GCCAGACCGA GGCAGCCTTT GCGCTGGGAC TGCGCCCGCG CCGCACCATG TCGCTGGTCG TGCTGCCCCA GGCGTTGCGG GTGATCGTGC CCCCGCTGAT CTCGCAATAC CTGAACCTGA CCAAGAACAG TTCGCTTGCC ATCGCCGTGG GCTACATGGA CCTGCGCGGC ACGCTGGGCG GCACCACGCT GAACCAGACC GGGCGCGAGA TGGAGGCGAT GGTGCTGATG ATGGGCATCT ATCTGGCGCT CAGCCTGATC ATCTCGGCCG GGATGAACAT CTTCAACAGC CGCGTCAAGC TGAAGGAGCG GTGA
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Protein sequence | MVTYTGADNP PFRLSMLIYD RRYRSLTLQA IVFILVMLAA SWLIDNTLRN LSAMGKTLSF DFLFRRAGYD IPQQLIPYNS DDTHLRATVI GLLNTLLVSI LGCIAATILG VIVGVLRLSS NWLIARLMTV YVEVFRNIPL LLWILVCLAI FTEVMPPPNA YRGENPAANM ILFDMIAPTN RYTAIPSIGM TNPPGTISLG REGISWAFIA FAVVIAAAWT GWRVLRNWAQ RVQDRTGKRP RTWWISLAMF VVPVLFLTWY FGLHLVPPVL RGFNFADGIN LDNAFVVLWL ALTLYTGAFI AEIVRAGILA VSRGQTEAAF ALGLRPRRTM SLVVLPQALR VIVPPLISQY LNLTKNSSLA IAVGYMDLRG TLGGTTLNQT GREMEAMVLM MGIYLALSLI ISAGMNIFNS RVKLKER
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