Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_0762 |
Symbol | rplB |
ID | 4580060 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008686 |
Strand | + |
Start bp | 746860 |
End bp | 747699 |
Gene Length | 840 bp |
Protein Length | 279 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639768081 |
Product | 50S ribosomal protein L2 |
Protein accession | YP_914570 |
Protein GI | 119383514 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0090] Ribosomal protein L2 |
TIGRFAM ID | [TIGR01171] ribosomal protein L2, bacterial/organellar |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.052515 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.51938 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCACTCA AGTCGTATAA GCCGACGACG CCTGGCCAGC GGGGGCTGGT TCTGATCGAC CGTTCGGAGC TTTGGAAAGG GCGCCCGGTC AAATCCCTCA CCGAGGGGCT GACCAAGAAC GGCGGCCGGA ACAACACCGG ACGGATCACG ATGCGCCGCA AGGGCGGCGG GGCGAAGCGT CTCTATCGCA TCGTCGATTT CAAACGCACC AAGTTCGATG TTTCGGCGAC GGTCGAGCGG ATCGAATACG ATCCCAACCG CACCGCCTTC ATCGCGCTGA TCAAATACGA AGACGGCGAG CAGGCCTATA TCCTGGCCCC GCAGCGTCTG GCGGTGGGCG ACAAGGTGAT CGCCGGCGCC AAGGTCGACG TGAAGCCCGG CAACGCCATG CCCTTCAGCG GCATGCCGAT CGGCACCATC GTCCACAACG TCGAGCTGAA GCCCGGCAAG GGCGGCCAGA TCGCCCGCTC GGCCGGCACC TATGCCCAGT TCGTCGGTCG TGACGGCGGC TATGCCCAGA TCCGCCTGTC TTCGGGCGAG CTGCGCCTGG TCCGCCAGGA ATGCATGGCT ACCATCGGCG CCGTGTCGAA CTCGGACCAC TCGAACCAGA ACTTCGGCAA GGCTGGTCGC AACCGTCACA AGGGCATCCG CCCGAGCGTG CGCGGTGTCG CCATGAACCC GATCGACCAC CCGCATGGCG GTGGTGAGGG TCGGACTTCG GGCGGCCGTC ACCCGGTCAC CCCCTGGGGC AAAGGCACCA AGGGCACCAG GACCCGCTCG AACAAATCGA CCGACAAGTA TATCTTGCGG TCGCGTCACG CGAAGAAGAA GGGGCGTTGA
|
Protein sequence | MALKSYKPTT PGQRGLVLID RSELWKGRPV KSLTEGLTKN GGRNNTGRIT MRRKGGGAKR LYRIVDFKRT KFDVSATVER IEYDPNRTAF IALIKYEDGE QAYILAPQRL AVGDKVIAGA KVDVKPGNAM PFSGMPIGTI VHNVELKPGK GGQIARSAGT YAQFVGRDGG YAQIRLSSGE LRLVRQECMA TIGAVSNSDH SNQNFGKAGR NRHKGIRPSV RGVAMNPIDH PHGGGEGRTS GGRHPVTPWG KGTKGTRTRS NKSTDKYILR SRHAKKKGR
|
| |