Gene Pden_0713 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_0713 
Symbol 
ID4579522 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp694780 
End bp695928 
Gene Length1149 bp 
Protein Length382 aa 
Translation table11 
GC content70% 
IMG OID639768031 
ProductL-carnitine dehydratase/bile acid-inducible protein F 
Protein accessionYP_914521 
Protein GI119383465 
COG category[C] Energy production and conversion 
COG ID[COG1804] Predicted acyl-CoA transferases/carnitine dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCCGC TGCAAGGCAT CAAGGTGCTG GACCTGTCCC GCGTGCTGGC GGGCCCTTAT 
TGCACCGCGC TTCTGGCCGA CCTGGGTGCC GAGGTCATCA AGCTGGAGCC CCCGGCCGGC
GACGATTACC GCCATATCGG CCCGTTCAAG GACGGTGAAA GCGCGCTGTT CACGCTGAAC
AACCGCGGCA AGCAAAGCCT TGTCTTGGAC CTGAAGGACC CCGGGGATCT GGCGCTGGCC
AAGGCCGTCG CGGCGCGCGT CGACGTGGTG GTCGAGAACT TCCGCCCCGG TGTCGCCGCC
CGCCTGGGCC TGGGCGCCGA GGCGCTGCGG GCGGAAAACC CGCGGCTGGT CTATTGCTCG
ATCTCGGGTT TCGGCCAGCA GGGACCGTTC CGCGACCTGC CGGCCTATGA CCTGGTGGTG
CAGGCCATGT CGGGGCTGAT GGCCGGCACG GGCGAGGAAG GCGGCGCGCC GCTCAAGACC
GGCGAAAGCG TCGCCGACCT GATCGCCGGC CTGTTCGGAA GCTGGGCGAT CATGGCGGCG
CTGGTCAATC GCAACGCCAC GGGGCAGGGC GCCACGCTGG ACGTCGCCAT GTATGACGCG
CTGTTTTCGA TGCTGACCAC CAGCCATGCG CTGCATTTCT ATGCCGGGGC GCTGCCGCAG
CGGGTGGGCA ACCGCCATCC CTTGTCCACC CCCTTCGGCT GCTTTGCGAC GCGGGACGGG
CAGGTGGTGA TCGCGGTGCT GAACGGCAAG CAATTCGCCG CGCTGGCCAC GCTGATCGGC
GCGCCGGATG CTGCGGACGA TCCGCGCTTT GCCAGCGACG AAAGCCGCAC CGCGCATGAG
CCCGAGCTCA AGCGACTGAT CGAAGGCTGG TCGCGCGGGC TGACCACCGA AGAGGCCGTC
GCCGCGCTTG CCGGGGCTGG TCTGCCCGCC GCGCCGATCT GGGACATCGC CCAGGCGGCA
AGCAACGAGC ACGCCCTGAC GCGCGGGCTG GTCAGCCGTC TGCCGCATCC GGTGCTGGGG
CTGGCACCGA CCATCGGCCA GCCGGTGCGC TTCGACGGAG AGAAACCCGT GGCCGAGACC
TCGGCCCCGC GCCTTGGCGG CGACCGCGCC GCCATCCTGC GCGAATTCGG ATTGGAGGAG
ACCGCATGA
 
Protein sequence
MKPLQGIKVL DLSRVLAGPY CTALLADLGA EVIKLEPPAG DDYRHIGPFK DGESALFTLN 
NRGKQSLVLD LKDPGDLALA KAVAARVDVV VENFRPGVAA RLGLGAEALR AENPRLVYCS
ISGFGQQGPF RDLPAYDLVV QAMSGLMAGT GEEGGAPLKT GESVADLIAG LFGSWAIMAA
LVNRNATGQG ATLDVAMYDA LFSMLTTSHA LHFYAGALPQ RVGNRHPLST PFGCFATRDG
QVVIAVLNGK QFAALATLIG APDAADDPRF ASDESRTAHE PELKRLIEGW SRGLTTEEAV
AALAGAGLPA APIWDIAQAA SNEHALTRGL VSRLPHPVLG LAPTIGQPVR FDGEKPVAET
SAPRLGGDRA AILREFGLEE TA