| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_0704 |
|---|
| Symbol | |
|---|
| ID | 4580645 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008686 |
|---|
| Strand | - |
|---|
| Start bp | 684138 |
|---|
| End bp | 685013 |
|---|
| Gene Length | 876 bp |
|---|
| Protein Length | 291 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639768022 |
|---|
| Product | dihydrodipicolinate synthase |
|---|
| Protein accession | YP_914512 |
|---|
| Protein GI | 119383456 |
|---|
| COG category | [E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
|---|
| TIGRFAM ID | [TIGR00674] dihydrodipicolinate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.55955 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCAAAG GCTCGCTGCC CGCGCTGGTC ACGCCCTTCA CCCCGGATGG GGAGTTGGAT
CTCCCCGCGC TGGAAAAGCT TGTCGAGTGG CATGTCGAAC AGGGCAGCCA CGGGCTGGTG
CCCGTCGGCA CCACCGGCGA AAGCCCGACG CTGAGCCATG AGGAGCACCG CCAGGTCATC
GAGGAAGTGG TGCGCATGGC CGCCGGCCGC ATCCCGGTCA TCGCCGGCGC CGGCTCGAAC
TCGACGCGCG AGGGCATCGG GCTGGTGCAG CACGCGCAGG CCGCGGGTGC CGACGCGGCG
CTGGTGGTGA CGCCTTATTA CAACAAGCCG ACCCAGGCCG GGCTGATCGC GCATTACACC
GCGCTGCACG ACGCCAGCGA CCTGCCGATC ATCATCTACA ACATCCCCGG CCGCTCGGTC
ATCGACATGC TGCCCGAGAC CATGGGCGAG CTGGCGAAGC TGCCGCGCAT CATCGGCGTC
AAGGACGCGA CCGGCAAGCT GGAGCGCGTC TCGATGCAGC GCGCCGCCTG CGGCAAGGAT
TTCGTCCAGC TTTCGGGCGA GGACGCGACC GCGCTCGGCT TCAACGCCCA TGGCGGAGTG
GGCTGCATCT CGGTCACGGC GAATGTCGCG CCGAAGCTTT GCGCCGCGTT CCAGGAGGCG
ACGCTGGCCG GCGACTACGC CAAGGCGCTG GACTATCAGG ACCGGCTGAT GCCCCTGCAT
GTGGCGATTT TCCTGGAGCC GGGCGTTTCC GGCGCAAAAT ATGCGATGTC GCGGCTGGGT
CTTTGCAGCG AACGGGTGCG CCTGCCGCTG GTCGGGCTGA CCGACGCCAC CAAGGTGCGC
ATCGACGAGG CGCTTGCCCA TGCCGGGCTG ATCTGA
|
|---|
| Protein sequence | MFKGSLPALV TPFTPDGELD LPALEKLVEW HVEQGSHGLV PVGTTGESPT LSHEEHRQVI
EEVVRMAAGR IPVIAGAGSN STREGIGLVQ HAQAAGADAA LVVTPYYNKP TQAGLIAHYT
ALHDASDLPI IIYNIPGRSV IDMLPETMGE LAKLPRIIGV KDATGKLERV SMQRAACGKD
FVQLSGEDAT ALGFNAHGGV GCISVTANVA PKLCAAFQEA TLAGDYAKAL DYQDRLMPLH
VAIFLEPGVS GAKYAMSRLG LCSERVRLPL VGLTDATKVR IDEALAHAGL I
|
|---|
| |