Gene Pden_0700 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_0700 
Symbol 
ID4580641 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp682658 
End bp683149 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content68% 
IMG OID639768018 
Productputative monovalent cation/H+ antiporter subunit E 
Protein accessionYP_914508 
Protein GI119383452 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1863] Multisubunit Na+/H+ antiporter, MnhE subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.937778 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCGCC GCCTGTTCCC GCATCCCTGG CTGTCGGTCA CGCTGGTCCT GGTCTGGATG 
GCCCTGGTCA ACCGCTGGGC CGTGGGCTCG CTGGTCTTTG CCGCGATCAT CGGCGTGGTG
GTGCCGCTGA TCACCGCGCC CTATTGGCCC GGCGCAAAGG GCTATCGCGC GCCCCACAGG
ATTCCGGCCT ATCTGGCCAT CGTGCTGTGG GACATCGCCA AGGCGAATTT CGCCGTGGCG
CGGATCGTGC TGTTCACGCC GCGCCGCGCG CTCCAGCCCG CCTGGATCGC CGTGCCGCTG
GACCTGCGCC ACCCCGAGGC GATCACCGCG CTGGCCGCGA CCATCACCCT GACCCCCGGC
ACGGTCAGTT GCGACTTGTC CGAGGACGGC CGCGCACTGC TGGTCCATGC CATGCACGCC
CCCGACCCGG ATGCGGTGCT GGATGAGATC AAGACCCGCT ACGAGGCCCG GTTGAAGGAG
ATCTTCGAAT GA
 
Protein sequence
MIRRLFPHPW LSVTLVLVWM ALVNRWAVGS LVFAAIIGVV VPLITAPYWP GAKGYRAPHR 
IPAYLAIVLW DIAKANFAVA RIVLFTPRRA LQPAWIAVPL DLRHPEAITA LAATITLTPG
TVSCDLSEDG RALLVHAMHA PDPDAVLDEI KTRYEARLKE IFE