Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_0640 |
Symbol | |
ID | 4580251 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008686 |
Strand | + |
Start bp | 617618 |
End bp | 620026 |
Gene Length | 2409 bp |
Protein Length | 802 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 639767958 |
Product | ATP-dependent helicase HrpB |
Protein accession | YP_914448 |
Protein GI | 119383392 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1643] HrpA-like helicases |
TIGRFAM ID | [TIGR01970] ATP-dependent helicase HrpB |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.163213 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.637588 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGCTGC CCATCGACGC CGTATTGCCC GAACTGACCG CCGCGCTGGC CGCGCATGGC CGCGCCGTGC TGATGGCGCC GCCGGGGGCG GGCAAGACGA CCCGCGTGCC CTTGGCGCTG CTGCCCGCGG TCCCCGGCCG CATCCTCATG CTGGAGCCGC GCCGCCTTGC CGCCCGCGCC GCGGCCGAGC GCATGGCCGA GACGCTGGGC GAGCCCCTGG GCCGGACCGT CGGCTATCGC ATCCGCGGCG AGGCGGTGGC GGGCACCCGC ATCGAGGTGG TGACCGAGGG CATCCTGACC CGCATGATCC AGTCCGACCC CGAGCTTTCG GGCATCGGCT GCGTGATCTT CGACGAATTC CACGAGCGCA GCCTGAATGC CGACCTGGGC CTGGCCCTGA CATGGGAAGC GCGCTCGGCG CTGCGCCCCG ACCTGGCGCT GCTGGTGATG TCGGCGACGC TGGATGCCGA GCCGGTCGCG GCGCTGATGG ACGGCGCCCC GGTGATCCGC TCGGAAGGCC GCGCCTTTCC GGTCGAGACG CGCTGGCTGG ACCGGCCCCT GCCCGCGGGC GCCCGGCTGG TCCCCGAGGC GGCGCGGCTG ATCGCCGATG CCGAGGCGGC GACGCGCGGG ACGGGCGGCA CCATCCTGGC CTTCCTGCCG GGCGAGGGCG AGATCCGCCG CGTCCTGGCC ATGCTGGACC TGGATGCCGA GGTGCTGCCG CTTTACGGCG CCATGGATTT CAAGGCGCAG CGCGCGGCCC TGCAACCCCC GGGCGGGCGA CGGCGGATCG TGCTTGCGAC CTCGATCGCC GAGACCTCGC TGACCATTCC CGAGGTGCGG GTGGTGGTCG ATGCCGGCCG TGCGCGGCGG GCGCGCTTCG ATCCCGGCTC GGGCATGTCG CGGCTGGTGA CCGAACGCGT CAGCCGCGCC GAGGCCGAGC AGCGCCGGGG CCGCGCGGGC CGCGTCGCGC CGGGCATCTG CTATCGCATG TGGGCGCGGG CCGAAGAAGG CGCGCTGCCG GCCTTCGCCC CGCCCGAGAT CGCGGTGGCC GACCTTGCCG GGCTGGCGCT GGAACTGGCG ATCTGGGGTT CGGACGGGCG CGACCTTGCC TTCCTGACCC CGCCGCCCGA GGCCGCGCTG GCCGAGGCGC GGGCGCTTTT GCGCGACCTG GGCGCGCTGG ATGCGGAGAA CCGCATCACC CCGCATGGCC GGCGGCTGGC GCCGCTGCCG CTGCATCCGC GGCTGGCGCA TATGCTGGTC ACGGCGGGGC GCGACGCCGC CGATCTGGCG GCGCTGATGG CCGAGCGCGA CCCGCTGACC GGCGCCCCCG CCGACCTGGC CCTACGGCTG GCGGCGATCC GCGACCTGCG GGCCTATCAG GACCGCTACC CCTGGCCGGT CAATCCCGGC GTCCTGCACC GCATCCGCGA CGAGGCAAAA CGCCTGCGCC GCATGGCGGA CGAGGGCGTC GGCCTGTCGC CTGGCGCCAT GGCGGCGCTG GCCTATCCCG ACCGCATCGG GCTGCGCCGC AAGGGCGACC AGCCGCGCCA CGTTCTGTCG GGTGGCAAGG GCGCGGTGCT GCCCGAAGGC GACGCCTTGG CCGCGCAGCG GCTGATCGTC GCGACCGATC TTGACGGCGA TGCGCGAGAG GCCCGCATCC GCATGGCGGT GGCCGTCGAT GAGGACGAGA TCCGCGCCCT GTTCCCCGAC CGTATCGAGA CCGTCGAGGT GGTGGAATGG TCCCGCCGCG ACAACCGCAT CCTTGCCCGC CGGCAGGAAC GCCTTGGCGC GCTGGCGCTG GCCGACCGGG CGCTGAACGA TCCCGACCCG CGGGCGCTAG CCCGCGCCGC CTTCGAAGGG CTGCGGGCCA ACGGGCTGAC CTGGACCCCC GGCGCCGCGC GGTTGCGGGC GCGGATGGCG CTGATCCCGG AATTGGGTCC GGTCGATGAC GCGAGCCTGC TTGCCGACGC GAACTGGCTG CTGCCTTACC TGGGCAAGGT GCGGACCTTG GCCGACCTGC GTGCGCTGGA TCTGACCGAG GCGCTGAAGG CGCGCATCGG CTGGGACGGC CAGCGCCGGC TGGACCAGGC GACGCCAGCG CATTTCGTCA CGCCCCTGGG CCGCAAGGTG CCTATCGACT ACGACCACGA GACGCCTTCG GTCGAACTGA AGCTGCAAGA GCTTTTCGGC CTGGCGCGGC ATCCGGTTGT CGGCGGCCGG CCGCTGCGCA TCACCATGCT GTCGCCCGGC GGCAAGCCCA TCGCGGTGAC GACCGACCTG CCGGGCTTCT GGGCGGGCGG CTATGGCGAG GTCCGCAAGG ACATGCGCGG CCGCTATCCG CGCCATCCCT GGCCGGAAAA CCCGCTGGAG GCCGACCCGA CCACAAGGGC CAAGCCGCGC GGAACCTGA
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Protein sequence | MQLPIDAVLP ELTAALAAHG RAVLMAPPGA GKTTRVPLAL LPAVPGRILM LEPRRLAARA AAERMAETLG EPLGRTVGYR IRGEAVAGTR IEVVTEGILT RMIQSDPELS GIGCVIFDEF HERSLNADLG LALTWEARSA LRPDLALLVM SATLDAEPVA ALMDGAPVIR SEGRAFPVET RWLDRPLPAG ARLVPEAARL IADAEAATRG TGGTILAFLP GEGEIRRVLA MLDLDAEVLP LYGAMDFKAQ RAALQPPGGR RRIVLATSIA ETSLTIPEVR VVVDAGRARR ARFDPGSGMS RLVTERVSRA EAEQRRGRAG RVAPGICYRM WARAEEGALP AFAPPEIAVA DLAGLALELA IWGSDGRDLA FLTPPPEAAL AEARALLRDL GALDAENRIT PHGRRLAPLP LHPRLAHMLV TAGRDAADLA ALMAERDPLT GAPADLALRL AAIRDLRAYQ DRYPWPVNPG VLHRIRDEAK RLRRMADEGV GLSPGAMAAL AYPDRIGLRR KGDQPRHVLS GGKGAVLPEG DALAAQRLIV ATDLDGDARE ARIRMAVAVD EDEIRALFPD RIETVEVVEW SRRDNRILAR RQERLGALAL ADRALNDPDP RALARAAFEG LRANGLTWTP GAARLRARMA LIPELGPVDD ASLLADANWL LPYLGKVRTL ADLRALDLTE ALKARIGWDG QRRLDQATPA HFVTPLGRKV PIDYDHETPS VELKLQELFG LARHPVVGGR PLRITMLSPG GKPIAVTTDL PGFWAGGYGE VRKDMRGRYP RHPWPENPLE ADPTTRAKPR GT
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