| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_0586 |
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| Symbol | murE |
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| ID | 4579630 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | + |
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| Start bp | 557715 |
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| End bp | 559184 |
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| Gene Length | 1470 bp |
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| Protein Length | 489 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639767904 |
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| Product | UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase |
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| Protein accession | YP_914394 |
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| Protein GI | 119383338 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0769] UDP-N-acetylmuramyl tripeptide synthase |
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| TIGRFAM ID | [TIGR01085] UDP-N-acetylmuramyl-tripeptide synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.510275 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.342392 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGCTGT CCCTTTTGGG GCTTAGGGGG GACAAGGGGC GCGACCCCGA GGTGACGGGC
CTTGCCGTCG ATTCGCGGCA GGTCAGGCCG GGCCATCTGT TCGCGGCACT GCCGGGCTCG
GCCACGCATG GGGGCGAGTT CATCCAATAC GCGCTGCGCC AGGGCGCCGG CGCGATCCTG
ACCGACCGCA AGGGCGCCGA GATCGCGGCG GCCGAGCTTG TCGGTGCCGA TGCCGCGCTG
GTCGTGGCCG AGGACCCGCG CGCAGCACTG GCCGGCGCTG CCGCCTTGTG GTTCGCGGCC
CAGCCCGAGA CGATGGTCGC CGTCACCGGC ACTTCCGGCA AGACCTCGGT CGCCAGTTTC
ACACGGCAGA TCTGGCAGGC GCTGGGCCAC AAGGCGATCA GCCTGGGCAC CATGGGCGTG
CAGGGCGACT ATCAGGCCAA GCTTGCCCAT ACCACGCCCG AGCCGATCAC CCTGCATCGC
GTGCTGGCCG AGGCCGCCGC TGCGGGCGTC ACCCATGCGG CGATGGAGGC CAGTTCGCAC
GGGCTGGACC AGCGCCGTCT GGACGGGGTG CGGCTGAAGG CCGGCGCCTT CACCAATTTC
AGCCAGGACC ACCTGGACTA CCACAAGGAT TTCGACGAAT ATTTCGCCGC CAAGGCACTG
CTTTTCGACC ATATCCTTGA AGAAGGCGCC GGGGCGGTCA TCAATATCGA CGATCCTCGC
GGCCGGCAGA TGGCGCAGAT CGCGGGCGAG CGTGGCCTGA AGCTGACCAC CATCGGCAAG
GACGAACGGG CGGACCTGCG CATCCTCGGC CAGCGCTATG ACGCGACCGG GCAGGATCTG
CGCTTCGGCT TCCACGGGCA GGCGCATCTG GTGCGGCTGG CGCTGATCGG CGGTTTCCAG
GCGGAAAACG TGCTCGCCGC GGCCGGCCTT GCCATCGCCG CCGGGGACGA GGCGCCCCGG
GTGATCGAGA CCTTGCCGGG CCTGACCACC GTGCGCGGTC GCATGGAACT GGCCGCGGTG
CGGGAAAACG GCGCGGCGGT CTTCGTCGAT TACAGCCACA AGCCCGGCGC GCTGGCCTCG
GCCCTGCAAT CGCTGCGCCC GCATGTCATG GGCCGCATCG TCGTGGTCTT CGGCGCCGGC
GGCGATCGCG ACCGGCTCAA GCGCCCGCTG ATGGGCGAGG CGGCGCGGCA ATTCGCCGAT
GTGGTCTATG TGACCGACGA CAACCCCCGC TCCGAGGATC CGGCTGCGAT TCGTGCCGAG
GTCATGGCCG GCGCTGGTCC CGACGCCATC GAGGTCGGCG ACCGCGCCGA GGCGATCCTG
CGCGGCGTCG ATGCCCTGCA ACCGGGCGAT GCGCTGCTGA TCGCCGGCAA GGGGCACGAG
ACCGGCCAGA TCATCGGCAG CGACGTTTAC CCCTTCGACG ATGCCGAGCA GGCCTCGGTG
GCCGTCGCGG CATTGGATGG CAAGATATGA
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| Protein sequence | MRLSLLGLRG DKGRDPEVTG LAVDSRQVRP GHLFAALPGS ATHGGEFIQY ALRQGAGAIL
TDRKGAEIAA AELVGADAAL VVAEDPRAAL AGAAALWFAA QPETMVAVTG TSGKTSVASF
TRQIWQALGH KAISLGTMGV QGDYQAKLAH TTPEPITLHR VLAEAAAAGV THAAMEASSH
GLDQRRLDGV RLKAGAFTNF SQDHLDYHKD FDEYFAAKAL LFDHILEEGA GAVINIDDPR
GRQMAQIAGE RGLKLTTIGK DERADLRILG QRYDATGQDL RFGFHGQAHL VRLALIGGFQ
AENVLAAAGL AIAAGDEAPR VIETLPGLTT VRGRMELAAV RENGAAVFVD YSHKPGALAS
ALQSLRPHVM GRIVVVFGAG GDRDRLKRPL MGEAARQFAD VVYVTDDNPR SEDPAAIRAE
VMAGAGPDAI EVGDRAEAIL RGVDALQPGD ALLIAGKGHE TGQIIGSDVY PFDDAEQASV
AVAALDGKI
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