Gene Pden_0572 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_0572 
SymbolsdhB 
ID4579693 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp544520 
End bp545299 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content61% 
IMG OID639767890 
Productsuccinate dehydrogenase iron-sulfur subunit 
Protein accessionYP_914380 
Protein GI119383324 
COG category[C] Energy production and conversion 
COG ID[COG0479] Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit 
TIGRFAM ID[TIGR00384] succinate dehydrogenase and fumarate reductase iron-sulfur protein 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.104644 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0936012 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCCAAC TTACCCTTCC CAAGAACAGC CGCATGCGGG TCGGCAAGAC CTGGCCGAAA 
CCCGAAGGCG CCACGAATGT CCGCCGCTTC AACATCTATC GCTGGGACCC CGATACCGGC
GAGAACCCGC GCATCGACAC CTATTTCGTC GACATGGACA AATGCGGTCC CATGGTGCTG
GACGCGCTGA TCAAGATCAA GAACGAGATC GACCCGACGC TGACCTTCCG CCGTTCCTGC
CGAGAGGGCA TCTGCGGCTC CTGCGCCATG AATATCGACG GCGGCAACCA TCTTGCCTGC
ATCTATGGCA TGGATGAGAT CAAGGGCGAC GTGAACATCT ACCCGCTGCC GCATATGCCG
GTGGTCAAGG ACCTGGTGCC GGACCTGACG CATTTCTATG CCCAGCACGC CTCGGTCCAG
CCCTATCTGA TCACCGAGAC GCCGACCCCC GACAAGGAAT GGCGCCAGTC GATCGAAGAC
CGCAAGAAGC TGGACGGCCT CTACGAATGT GTGATGTGCG CCAGCTGCTC GACCGCCTGT
CCCAGCTATT GGTGGAACGG CGATCGCTAT CTGGGTCCGG CGGCCTTGTT GCACGCCTAT
CGCTGGATCA TCGACTCGCG CGACGAAGCC ACGGGCGAGC GTCTGGACTC GCTTGAGGAT
CCGTTCAAGC TGTATCGCTG CCACACGATC ATGAACTGCA CCAACACCTG CCCCAAGGGG
CTGAACCCGG CCAAGGCGAT CGCCTCGATC AAGCACATGA TGGTGGACCG GATCGTCTGA
 
Protein sequence
MVQLTLPKNS RMRVGKTWPK PEGATNVRRF NIYRWDPDTG ENPRIDTYFV DMDKCGPMVL 
DALIKIKNEI DPTLTFRRSC REGICGSCAM NIDGGNHLAC IYGMDEIKGD VNIYPLPHMP
VVKDLVPDLT HFYAQHASVQ PYLITETPTP DKEWRQSIED RKKLDGLYEC VMCASCSTAC
PSYWWNGDRY LGPAALLHAY RWIIDSRDEA TGERLDSLED PFKLYRCHTI MNCTNTCPKG
LNPAKAIASI KHMMVDRIV