Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_0572 |
Symbol | sdhB |
ID | 4579693 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008686 |
Strand | + |
Start bp | 544520 |
End bp | 545299 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 639767890 |
Product | succinate dehydrogenase iron-sulfur subunit |
Protein accession | YP_914380 |
Protein GI | 119383324 |
COG category | [C] Energy production and conversion |
COG ID | [COG0479] Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit |
TIGRFAM ID | [TIGR00384] succinate dehydrogenase and fumarate reductase iron-sulfur protein |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.104644 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0936012 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTCCAAC TTACCCTTCC CAAGAACAGC CGCATGCGGG TCGGCAAGAC CTGGCCGAAA CCCGAAGGCG CCACGAATGT CCGCCGCTTC AACATCTATC GCTGGGACCC CGATACCGGC GAGAACCCGC GCATCGACAC CTATTTCGTC GACATGGACA AATGCGGTCC CATGGTGCTG GACGCGCTGA TCAAGATCAA GAACGAGATC GACCCGACGC TGACCTTCCG CCGTTCCTGC CGAGAGGGCA TCTGCGGCTC CTGCGCCATG AATATCGACG GCGGCAACCA TCTTGCCTGC ATCTATGGCA TGGATGAGAT CAAGGGCGAC GTGAACATCT ACCCGCTGCC GCATATGCCG GTGGTCAAGG ACCTGGTGCC GGACCTGACG CATTTCTATG CCCAGCACGC CTCGGTCCAG CCCTATCTGA TCACCGAGAC GCCGACCCCC GACAAGGAAT GGCGCCAGTC GATCGAAGAC CGCAAGAAGC TGGACGGCCT CTACGAATGT GTGATGTGCG CCAGCTGCTC GACCGCCTGT CCCAGCTATT GGTGGAACGG CGATCGCTAT CTGGGTCCGG CGGCCTTGTT GCACGCCTAT CGCTGGATCA TCGACTCGCG CGACGAAGCC ACGGGCGAGC GTCTGGACTC GCTTGAGGAT CCGTTCAAGC TGTATCGCTG CCACACGATC ATGAACTGCA CCAACACCTG CCCCAAGGGG CTGAACCCGG CCAAGGCGAT CGCCTCGATC AAGCACATGA TGGTGGACCG GATCGTCTGA
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Protein sequence | MVQLTLPKNS RMRVGKTWPK PEGATNVRRF NIYRWDPDTG ENPRIDTYFV DMDKCGPMVL DALIKIKNEI DPTLTFRRSC REGICGSCAM NIDGGNHLAC IYGMDEIKGD VNIYPLPHMP VVKDLVPDLT HFYAQHASVQ PYLITETPTP DKEWRQSIED RKKLDGLYEC VMCASCSTAC PSYWWNGDRY LGPAALLHAY RWIIDSRDEA TGERLDSLED PFKLYRCHTI MNCTNTCPKG LNPAKAIASI KHMMVDRIV
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