Gene Pden_0521 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_0521 
Symbol 
ID4578708 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp490561 
End bp492984 
Gene Length2424 bp 
Protein Length807 aa 
Translation table11 
GC content71% 
IMG OID639767838 
Productheavy metal translocating P-type ATPase 
Protein accessionYP_914329 
Protein GI119383273 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2217] Cation transport ATPase
[COG2608] Copper chaperone 
TIGRFAM ID[TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01511] copper-(or silver)-translocating P-type ATPase
[TIGR01525] heavy metal translocating P-type ATPase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACATC ACCAGAACGA TGCCGAGCTG ACCGTCACCG GCATGAGTTG CGCCTCTTGC 
GTGGGCCGCG TCGAAAAGGC GTTGGCCGCC GTGCCGGGCG TCGAAGAGCC GCGGGTCAAC
CTGGCCACCG GCCGGGCGCA TTTCCGCCTG ACCGCGCCCG AGGCCCTGCC CCGCGCCGTC
GAGGCGCTGG CGGGCGCCGG CTATCCCGCC GCACCGCTTG AAACCCGCCT GAGCATCGAG
GGCATGAGCT GCGCCTCTTG CGTGGGCCGC GTCGAAAAGG CGCTGGCGGC GCTGCCCGGC
GTGACTTCGG CGCAGGTCAA CCTGACCACC GCCAGCGCCA CCATCCATCA TTCGCCCGGC
GTCGCGCCGC AGGCGCTGGC CGATACGGTG ACCGCCAAGG GCTATCCCGC CGAGCTGCAG
GCCGAGGCCG GCCATCACAT GCACGACCAT GGCGGCGATG CGGCGAGCAT GAAGCGCAAC
TTCCTGGTCG CGCTGGTGCT GACCCTGCCG GTCTTTGTCG CCGAGATGGG CGGCCATGCC
TTTCCGGCCT TTCATCATTG GCTGCACATG GCGCTTGGCC AACAGACGCT CTGGGTGCTG
GAGTTCCTGC TGACCACCGC CGTCCTGGCC GGGCCGGGAC GGGTGTTCTT CCGCGTCGGC
TTTCCCGCGC TCATGCGCCG CGCGCCCGAG ATGAACAGCC TTGTCGCGCT TGGCGCCTCG
GCGGCGTGGC TTTACTCGAC CGTGGCGACC TTTGCACCAG GCGTGCTGCC GGCGGATTCG
GTGCATGTCT ATTTCGAGGC CGCCGCCGTC ATCGTCACGC TGATCCTGCT GGGCCGCTGG
CTGGAGGCGC GCGCCAAGGG CCGCGCCGGC AACGCCATCC GCCGGTTGAT CGAACTGGCC
CCCGACAGCG CCCATGTCCA GCGCGACGGC CGGATCGTGG AAATCCCGGT GGCCGAACTG
CACCCCGGCG ACATCGTGCA CCTGCGCCCC GGCGAACGGG TGGCCGTGGA CGGGGTGCTG
ACCGAGGGCA GCGGCGCCAT CGACGAATCC ATGCTGACGG GCGAGCCGGT CCCGGTCGCC
AAGCAGCCCG GCGACACGGT CACCGGCGGC ACGGTGAACG GCAATGCAGC ACTGGCCTAT
CGCGTGACCG CGACCGGCGG CAACACGGTG CTGGCCCGCA TCATCCGCAT GGTCGAGGAC
GCGCAGGCCA CCAAGCTGCC GGTGCAAGCG CTGGTGGACC GGATCACCGC GGTCTTCGTC
CCGGTGGTGA TCGGGTTGGC GCTGCTGACC TTCGTGCTGT GGATGATCTT CGCCGGCTCG
CTGGGACAGG CGCTGGTCGC GGCGATCTCG GTCCTGATCA TCGCCTGCCC CTGCGCCATG
GGGCTGGCGG TGCCGGTCTC GATCATGGTC GGCACCGGGC GCGGCGCCGA GTTGGGCGTG
CTGTTCCGGC GCGGCGACGC GCTGCAAAGG CTGGCCGAGG CGCGCATCGT CGCCCTGGAC
AAGACCGGCA CGCTGACCCA GGGCGCACCC GCCCTGACCG CCATCGAGGC CGAGGACATC
GAGCCCCTGG ACGCCCTGCG CCTTGCCGCC GCTGCCGAGG CGCGTTCCGA GCATCCGCTG
GCGGCCGCCA TCGTCGGCGC CGCCCGCGAC AAGGGGCTGG ACCTGCCCCC GGCCGAGGCG
GTTCAGGCCG CTGTGGGGCG CGGACTTTCG GCGCGGGTCG AGGGGCGGGC GCTGCTTATC
GGCAATGCCG CCGCGCTGAC CGAGGCCGGC ATCACCCCCT CGCCCGCCCT GATCGCCGCG
GCCGAGGGCT GGGCGGCGAA CGGCGCGACC CCCGTGCATC TGGCAGTGGA CGGCCGTCAC
GCCGCCGCCA TGGCGCTGGC CGATCCGATC CGCCCCGAGG CGGCCGAAAC CATCGCCGAA
CTGCACACGC TTGGCCTGCA AACCGCGATG ATCTCGGGCG ACGTGCGGGC CACGGCCGAG
GCGGTCGGAC GCAAGCTGGG CATCGACACG GTGACGGCGG GCGTCCTGCC CGAAGGCAAG
CTGGCCGCCA TCCGCGAGAT GGGGGGCGGC ACGGTCTTTG TCGGCGACGG CATCAACGAC
GCACCGGCGC TTGCCGCGGC CGAAACCGGC ATCGCCATCG GCACCGGCAC GGATGTCGCC
ATCGAATCGG CCGAGGTGGT GCTGGTCGGC GGCGATCCGA TGGGTGTCGC GCGGGCTATC
CGCCTGTCAC GCAGCGTCAT GCGCAATATC CGGCAGAATC TGTTCTGGGC CTTCGGCTAC
AATGTCGCCC TGATTCCCGT GGCAATGGGG GCGCTGGTGC CCTTTGGCGG GCCGCAGATG
TCACCCATGC TGGGGGCCGG GGCGATGGCG CTTTCCTCGG TCTTCGTGGT CAGTAACGCG
TTGCGATTGA GGCGTGCCGC ATGA
 
Protein sequence
MKHHQNDAEL TVTGMSCASC VGRVEKALAA VPGVEEPRVN LATGRAHFRL TAPEALPRAV 
EALAGAGYPA APLETRLSIE GMSCASCVGR VEKALAALPG VTSAQVNLTT ASATIHHSPG
VAPQALADTV TAKGYPAELQ AEAGHHMHDH GGDAASMKRN FLVALVLTLP VFVAEMGGHA
FPAFHHWLHM ALGQQTLWVL EFLLTTAVLA GPGRVFFRVG FPALMRRAPE MNSLVALGAS
AAWLYSTVAT FAPGVLPADS VHVYFEAAAV IVTLILLGRW LEARAKGRAG NAIRRLIELA
PDSAHVQRDG RIVEIPVAEL HPGDIVHLRP GERVAVDGVL TEGSGAIDES MLTGEPVPVA
KQPGDTVTGG TVNGNAALAY RVTATGGNTV LARIIRMVED AQATKLPVQA LVDRITAVFV
PVVIGLALLT FVLWMIFAGS LGQALVAAIS VLIIACPCAM GLAVPVSIMV GTGRGAELGV
LFRRGDALQR LAEARIVALD KTGTLTQGAP ALTAIEAEDI EPLDALRLAA AAEARSEHPL
AAAIVGAARD KGLDLPPAEA VQAAVGRGLS ARVEGRALLI GNAAALTEAG ITPSPALIAA
AEGWAANGAT PVHLAVDGRH AAAMALADPI RPEAAETIAE LHTLGLQTAM ISGDVRATAE
AVGRKLGIDT VTAGVLPEGK LAAIREMGGG TVFVGDGIND APALAAAETG IAIGTGTDVA
IESAEVVLVG GDPMGVARAI RLSRSVMRNI RQNLFWAFGY NVALIPVAMG ALVPFGGPQM
SPMLGAGAMA LSSVFVVSNA LRLRRAA