| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_0503 |
|---|
| Symbol | |
|---|
| ID | 4581045 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008686 |
|---|
| Strand | - |
|---|
| Start bp | 474658 |
|---|
| End bp | 475452 |
|---|
| Gene Length | 795 bp |
|---|
| Protein Length | 264 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639767820 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_914311 |
|---|
| Protein GI | 119383255 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1129] ABC-type sugar transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGCGA ACATTTCCGG GGAACCGCTT CTGAAGGCCC GTGGCCTGGT CAAGCGCTAT
GGCAAGGTCA CCGCGCTGGA TCATTGCGAC TTCGACCTGC TGCCGGGCGA GATCCTGGCC
GTCATCGGCG ACAACGGCGC CGGCAAGTCC TCGCTGATCA AGGCGCTTTC CGGCGCGGTC
CAGCCCGACG AGGGCGAGAT CGCGCTGGAG GGCAAGCCGG TGCGCTTTGC CAACCCGCTG
GATGCGCGCG GCTATGGCAT CGAATGCGTC TACCAGACGC TGGCCATGTC GCCTGCCCTT
TCCATCGCCG ACAACATGTT CATGGGGCGC GAATTGCGCA AGCCGGGCAT CATGGGCCAG
TGGTTTCGCA AGCTGGACCG CCCGGCGATG GAGAAGTTCG CCCGCGAAAA GCTGACCGAG
CTGGGGCTGA TGACGATCCA GAACATCAAC CAGGCGGTCG AAACGCTTTC CGGCGGCCAG
CGCCAGGGCG TCGCGGTGGC GCGGGCGGCC GCCTTCGGGT CAAAGGTGGT GATCCTGGAC
GAGCCGACGG CGGCACTTGG CGTCAAGGAA AGCCGCCGCG TGCTGGAACT GATCCGCGAC
GTGCGCTCGC GCGGCATCCC GATCATCCTG ATCAGCCACA ACATGCCGCA TGTCTTCGAG
GTGGCGGACC GCATCCATAT CCACCGGCTG GGGCGGCGGC TCTGCGTGAT CCGGCCGGAC
GACTATTCCA TGTCGGACGC GGTGGCCTTC ATGACCGGCG CCAAGCTGCC GGAAGAGGCG
GCGACGGCAG CCTGA
|
|---|
| Protein sequence | MTANISGEPL LKARGLVKRY GKVTALDHCD FDLLPGEILA VIGDNGAGKS SLIKALSGAV
QPDEGEIALE GKPVRFANPL DARGYGIECV YQTLAMSPAL SIADNMFMGR ELRKPGIMGQ
WFRKLDRPAM EKFAREKLTE LGLMTIQNIN QAVETLSGGQ RQGVAVARAA AFGSKVVILD
EPTAALGVKE SRRVLELIRD VRSRGIPIIL ISHNMPHVFE VADRIHIHRL GRRLCVIRPD
DYSMSDAVAF MTGAKLPEEA ATAA
|
|---|
| |