Gene Pden_0491 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_0491 
Symbol 
ID4579108 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp463157 
End bp463960 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content64% 
IMG OID639767807 
Productundecaprenyl pyrophosphate phosphatase 
Protein accessionYP_914299 
Protein GI119383243 
COG category[V] Defense mechanisms 
COG ID[COG1968] Uncharacterized bacitracin resistance protein 
TIGRFAM ID[TIGR00753] undecaprenyl-diphosphatase UppP 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACCACA ACACCATCGT TGCCGCCGCC CTTGGTCTGC TGGAGGGGCT GACCGAGTTC 
ATTCCCGTGT CCTCGACCGG CCATGTGCTG CTGGCCGGGC ATTTCCTGGG CTTCGATTCG
CCCGGACGCG CCTTCGAGGT GCTGATCCAG CTTGGCGCCA TCATGGCCAT CCTGGGCGTT
TATGCCGGGC GGCTGTGGCG GATCTTTTCC AGCGCGCCGC AGGACCCGCG CGCGCGGCGC
TTCATCCTGG CGGTGCTGCT TGCCTTCCTG CCCGCGGTGG TGATCGGCGT GCTGGCGCAT
CGGATCATCA AGGAAGTCCT GTTCGAGACC CCTACCCTGA TCGCCGTCAT GCTGATCGTG
GGTGGTGTGG TGCTGCTGTT CGTTGATCGG ATGGCGAACC GACCGCGCCA TTTCTCGGCC
GAGGATTTCC CGCTGCCCAT GGCGCTGAAG ATCGGCTTCA TCCAGTGCCT GGCGATGATT
CCCGGCGTCT CGCGTTCCGG CGCGACCATC GTCGGTGCCC TGCTGCTGGG CGCGGACAAG
CGTTCTGCCG CCGAATTCAG CTTTTTCCTG TCCATGCCGA CGATGTTGGG CGCTTTCGTC
TATGACCTCT ACAAGAACCG CGACATCCTG GACGCGGCGG CGACCGGCAA TATCGTCATC
GGCTTCGTCT GTGCATTCCT GGCCGCCGTC GTCGTGGTGC GCGGGCTGCT GAACTATGTC
TCGACCTATG GCTACGGCCT GTTCGCCTGG TGGCGAATCG CGGTCGGGGT GGCGGTTCTG
CTGGCTTTGC AGGCAGGTTG GTAA
 
Protein sequence
MDHNTIVAAA LGLLEGLTEF IPVSSTGHVL LAGHFLGFDS PGRAFEVLIQ LGAIMAILGV 
YAGRLWRIFS SAPQDPRARR FILAVLLAFL PAVVIGVLAH RIIKEVLFET PTLIAVMLIV
GGVVLLFVDR MANRPRHFSA EDFPLPMALK IGFIQCLAMI PGVSRSGATI VGALLLGADK
RSAAEFSFFL SMPTMLGAFV YDLYKNRDIL DAAATGNIVI GFVCAFLAAV VVVRGLLNYV
STYGYGLFAW WRIAVGVAVL LALQAGW