| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_0425 |
|---|
| Symbol | |
|---|
| ID | 4579471 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008686 |
|---|
| Strand | - |
|---|
| Start bp | 396309 |
|---|
| End bp | 397955 |
|---|
| Gene Length | 1647 bp |
|---|
| Protein Length | 548 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639767742 |
|---|
| Product | electron-transferring-flavoprotein dehydrogenase |
|---|
| Protein accession | YP_914235 |
|---|
| Protein GI | 119383179 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0644] Dehydrogenases (flavoproteins)
[COG2440] Ferredoxin-like protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGAAA TTGAACGCGA GTCGATGGAT TACGACGTGG TGATCGTCGG CGGCGGGCCT
GCGGGCCTGT CGGCGGCGAT CCGGCTGAAG CAGGTGAACC CCGAGCTTTC CGTGGTGCTG
CTGGAGAAGG GCTCCGAGAT CGGCGCGCAT ATCCTCTCGG GCGCGGTGCT CGACACTTCG
GGCCTCGACC GGCTGATCCC GGACTGGAAG GACAGGGGCG CCCCGGTCAC CACCGAGGTC
ACCCAGGACA ACTTCTACAT CCTCGGCCCG CATGGCCAGG TCCGGGTGCC GAACTGGCCC
ATGCCGCCCC TGATGAACAA TCACGGCAAA TACATCGTCT CGATGGGCAA TGTCTGCCGC
TGGCTCGCCG AGCAGGCCGA GGCGCTGGAA GTCGAGATCT TCCCCGGCAT GGCCTGCTCG
CAACTGGTCT ACGAGGGCGA CCGCGTCGTC GGCGTCGTGG CCGGCGAGAT GGGGCTGAAT
GCCGACGGCT CCCCCGGCCC GGCCTACGAG CCCGGCATGG AGCTGCGCGG CAAATACGTG
CTGATCGCCG AGGGCGTGAG GGGCAGCCTC GCCAAGGAGC TGATCGGCAA ATACGACCTC
TCGGCCGGCC ATGAGCCGCA GAAATTCGGC CTCGGCATGA AGGAGATCTG GGAGATCGAC
CCGGCCAAGG CCCGCCCCGG CACCGTCACC CACACCATGG GCTGGCCCTT GGGCAAGAAC
GCCGGCGGCG GCAGCTTCAT CTATCACCTC GAGGGCAACC AGGTGCTGGT CGGCTTCGTC
GTGCACCTGA ACTACGCCAA TCCCTATCTC TATCCCTACA TGGAGTTCCA GCGCTTCAAG
CACCACCCGC TGGTCGCGGA CCTGCTGGAA GGCGGCAAGC GCGTGGCTTA CGGCGCCCGC
GCCATCTCCG AGGGCGGCTG GCAGTCGATC CCCAAGCTGA CCGTGCCGGG GGCGGCGCTG
CTCGGTTGCT CGGCCGGGCT GGTGAACGTG CCGCGCATCA AGGGCAACCA CAATGCCATG
CTGTCGGGGA TCGCCGCGGC CGAGGCGGCA GCCAAGGCCA TCGCCGCGGG CCGCGAGGGC
GACGAGCTCA CGGACTACGA GGCCGACCTG CGTTCCGGCC CCATCGCCCG CGACCTGAAG
CCGGTCAGGA ACGTCAAGCC GCTGTGGTCG AAGCTGGGGC TGTGGTCTTC GCTGGTGCTC
GGCGGCTTCG ACATGTGGGT GGCGAACCTG ACCGGCTGGA ACCCCTTGGG CACCTGGAAG
CACGGCAAGA CGGATGCGCA GGCCACCGGC AAGGCGGCGG ATTTCCAGCC CATCGACTAT
CCGCGCCCGG ACGGCAAGCT CAGCTTCGAC CGGCTGACCA ACGTGGCGTT TTCCTTCACC
AATCACGAGG AAAGCCAGCC CTGCCACCTG AAGCTGAAGG ACCCCGCGGT GCCGATCGCG
GTGAACCTGC CGCTTTATGC CGAGCCGGCG ACCCGCTATT GCCCGGCCGG GGTCTACGAG
GTGCTGGAGG GCGAGGGCGG CCCGCGCTTC CAGATCAACT TCCAGAACTG CGTGCATTGC
AAGACCTGCG ACATCAAGGA CCCCAGCCAG AACATCAACT GGACAACACC CCAGGGCGGA
GACGGACCCA ACTACCCGAA TATGTGA
|
|---|
| Protein sequence | MSEIERESMD YDVVIVGGGP AGLSAAIRLK QVNPELSVVL LEKGSEIGAH ILSGAVLDTS
GLDRLIPDWK DRGAPVTTEV TQDNFYILGP HGQVRVPNWP MPPLMNNHGK YIVSMGNVCR
WLAEQAEALE VEIFPGMACS QLVYEGDRVV GVVAGEMGLN ADGSPGPAYE PGMELRGKYV
LIAEGVRGSL AKELIGKYDL SAGHEPQKFG LGMKEIWEID PAKARPGTVT HTMGWPLGKN
AGGGSFIYHL EGNQVLVGFV VHLNYANPYL YPYMEFQRFK HHPLVADLLE GGKRVAYGAR
AISEGGWQSI PKLTVPGAAL LGCSAGLVNV PRIKGNHNAM LSGIAAAEAA AKAIAAGREG
DELTDYEADL RSGPIARDLK PVRNVKPLWS KLGLWSSLVL GGFDMWVANL TGWNPLGTWK
HGKTDAQATG KAADFQPIDY PRPDGKLSFD RLTNVAFSFT NHEESQPCHL KLKDPAVPIA
VNLPLYAEPA TRYCPAGVYE VLEGEGGPRF QINFQNCVHC KTCDIKDPSQ NINWTTPQGG
DGPNYPNM
|
|---|
| |