| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_0412 |
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| Symbol | |
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| ID | 4578699 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | + |
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| Start bp | 381210 |
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| End bp | 382754 |
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| Gene Length | 1545 bp |
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| Protein Length | 514 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639767729 |
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| Product | ATP dependent DNA ligase |
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| Protein accession | YP_914222 |
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| Protein GI | 119383166 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1793] ATP-dependent DNA ligase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.900501 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.90981 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGCCT TTGCCGCCCT TCTGGAACGG CTGGCCTTCA CGCCGGCGCG TAATGCCAAG
CTGCAGCTTT TGCAGCACTA TCTGGAGCGC ACGCCCGACC CGGATCGCGG CTGGGCGCTG
GCCGCGCTGA CCGGCGATCT GGAGTTGCGC AGGGTCACGC CCTCGCTTTT GCGGGGGCTG
GCGGCCGAGC GGGTGGATGG CGAGCTTCTG GCGCTGAGCT ACGATTTCGT CGGCGATCTG
GCCGAAACCA TTGCGCTGCT CTGGCCCGAG GGGGCCGAGG ACGACCCATC GCTGTCCCAG
GCGGTCGCGC TGTTGCAGGG GACCGGCAAG GCGGCGCTGC CCGGCGCCAT CGCCGGCATG
CTGGACCGGC TGGGCCCGTC CGAGCGGTTG GCCTTTCTGA AGCTTGCCAC CGGAAACCTG
CGCATCGGCG TTTCTGCCCG CATGGCGCGG ACGGCGCTGG CGGGGATGGG CGTGCCCTCG
GTCCCCGAGA TCGAGGAGAT CTGGCACGGG CTCGCGCCGC CCTATGCGCC GCTGTTCGGC
TGGCTGGGCG GCGGGGCGCG GCCGGAAAGC GCGGCGCTGG CGCCGTTCCG GCCGGTGATG
CTGTCCACGC CGACCGACCT GGACGAGCTG CGCGCGCTGG ACCCCGGCGA TTACCTTGCG
GAATGGAAAT GGGACGGCAT CCGCGTGCAG GCGGTCAGCG AAGGCGGCAT GCGGCGGCTG
TATTCCCGCA CGGGCGAGGA TATCTCGCAC GCCTTTCCCG ACGTGATCGA GGCGATGGAT
TTCGACGGCA CCGCCGATGG CGAGCTGATC GTGCGGCGCG AGGGCGAGGT GGCGCCCTTC
GGCGACCTGC AAAAGCGGCT GAACCGCAAG ACCGTCGGCA AGGGGCTGCT TGCCAGCCAT
CCGGCGGGAC TGCGGCTTTA CGACCTGCTG CTGTGGGACG GCCGCGACCT GCGCGCCGAG
CCGTTGGGCG CCCGCCGCAC CGTGCTGGAA GCCGTGGATT TCGGGCCGCG GATCGACATC
TCGCCCCTGC TGGACTTTGC CACATGGGAG GATCTGGCCG CGCTGCGCGC CGAACCGCCC
GCCGCCGTCA TCGAGGGGGT GATGATCAAG CGGCGCGACA GCGCCTATGT CGCCGGCCGG
CCGCGCGGGC CATGGTTCAA GTGGAAGCGC GATCCGATGG TGGTCGATGC GGTGCTGATC
TATGCGCAGC GCGGGCATGG CAAACGCTCG GGCTTTCATT CCGACTTCAC CTTTGGCCTG
TGGGATGGCG GCGAACTGGT GCCGGTGGGC AAGGCCTATT TCGGCTTTAC AGATGCCGAA
CTGCGCGAGC TGGACCGCTT CGTGCGCCAG AATACCGTCG AGCGTTACGG ACCTGTCCGG
GCGCTGGCGC CGAAACTGGT GGTCGAGGTG GCCTTCGAGG GCTTGAACCG CTCGACCCGG
CACCGTTCGG GCGTGGCCAT GCGCTTTCCC CGCATCAGCC GTATCCGCTG GGACAAGCCT
GCCGCTGAGG CCGATCGTCT TGAAACACTT GAGGCGATGC TGTGA
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| Protein sequence | MKAFAALLER LAFTPARNAK LQLLQHYLER TPDPDRGWAL AALTGDLELR RVTPSLLRGL
AAERVDGELL ALSYDFVGDL AETIALLWPE GAEDDPSLSQ AVALLQGTGK AALPGAIAGM
LDRLGPSERL AFLKLATGNL RIGVSARMAR TALAGMGVPS VPEIEEIWHG LAPPYAPLFG
WLGGGARPES AALAPFRPVM LSTPTDLDEL RALDPGDYLA EWKWDGIRVQ AVSEGGMRRL
YSRTGEDISH AFPDVIEAMD FDGTADGELI VRREGEVAPF GDLQKRLNRK TVGKGLLASH
PAGLRLYDLL LWDGRDLRAE PLGARRTVLE AVDFGPRIDI SPLLDFATWE DLAALRAEPP
AAVIEGVMIK RRDSAYVAGR PRGPWFKWKR DPMVVDAVLI YAQRGHGKRS GFHSDFTFGL
WDGGELVPVG KAYFGFTDAE LRELDRFVRQ NTVERYGPVR ALAPKLVVEV AFEGLNRSTR
HRSGVAMRFP RISRIRWDKP AAEADRLETL EAML
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