Gene Pden_0284 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_0284 
Symbol 
ID4580189 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp262191 
End bp262934 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content71% 
IMG OID639767599 
ProductAsp/Glu racemase 
Protein accessionYP_914094 
Protein GI119383038 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3473] Maleate cis-trans isomerase 
TIGRFAM ID[TIGR02990] ectoine utilization protein EutA 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACTGTCC TGTCCGTTCC CGTCGCCCTT GACGAACGCC CGCTGCCGCG CCGCGTCGGT 
CTGGTGACGC TGGCCACCGA CCACACGACC GAGGTCGATT TCTCGGCCCT GCCGGCGCAT
GGCGTGGGCG TCTATGCCAC CCGCATCCCC TTTGCCAACC CGGTGACGCC CGAGACGCTG
GCCGCCATGG CGCGCGACGT GACGGCGGCC GCTGCGCTGA TCCTGCCCGA CGAGGAACTG
GATGCGGTGG TCTATAGCTG CACCTCGGCC TCGGTGGTGA TCGGGGATCA GGCCGTGCGG
GACGCGATCC GGCTGGGCAA GCCCTCGGCG GAACCGATCA CGCCGATCTC GGCCGGTTTC
GCTGCGCTCA GGGCGCTGGA GGCAGGGCGG ATCACGCTGC TGACCCCCTA TACTCCCCGG
ACGACCCAGC CGATGGCGGA ATGCTTCGAG GCGGGTGGTT TCGTGCTGCA AGGCGTGTCC
TGCCTGAACC TGACCGACGA CCGCGAGATG GCGCGGATTT CCCATGCGAC GATCGTCGAG
GCCGCCCGCG CCGCGCTGGC GCCGGGCAGC CAGGCGCTGT TTGTCGCCTG CACCGCCGTC
CGCGCGGCCG CGATCATCGA CCGGATCGAG GATGCGCTGG GCGTGCCGGT GGTCTCGGCC
AATTCGGCGA CGCTCTGGGC CGCGGCGCGG GCCTGCGGCA TCTCCGGGCC GGTGGCGCCC
GGACAGTTGA TGAGGCTGGC ATGA
 
Protein sequence
MTVLSVPVAL DERPLPRRVG LVTLATDHTT EVDFSALPAH GVGVYATRIP FANPVTPETL 
AAMARDVTAA AALILPDEEL DAVVYSCTSA SVVIGDQAVR DAIRLGKPSA EPITPISAGF
AALRALEAGR ITLLTPYTPR TTQPMAECFE AGGFVLQGVS CLNLTDDREM ARISHATIVE
AARAALAPGS QALFVACTAV RAAAIIDRIE DALGVPVVSA NSATLWAAAR ACGISGPVAP
GQLMRLA