| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_0235 |
|---|
| Symbol | |
|---|
| ID | 4580815 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008686 |
|---|
| Strand | - |
|---|
| Start bp | 215905 |
|---|
| End bp | 216918 |
|---|
| Gene Length | 1014 bp |
|---|
| Protein Length | 337 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639767550 |
|---|
| Product | oligopeptide/dipeptide ABC transporter, ATPase subunit |
|---|
| Protein accession | YP_914045 |
|---|
| Protein GI | 119382989 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG4608] ABC-type oligopeptide transport system, ATPase component |
|---|
| TIGRFAM ID | [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGGCCG ATATTCTCAG GGTTGAAGGA CTGGGCAAGA CCTTCGAAGG TGGCGGCGGC
CTGCTGGGGG GCAAGCGCGC CGCGGTGCGG GCGGTGGACG GCATCGACCT GACGATGAAG
GCTGGCGAAA CCCTGGCCGT GGTGGGCGAA TCCGGCTGCG GAAAATCGAC CCTCGGCCGC
CTGCTCTTGC GCCTGATCGA ACCAAGCGAG GGAAGGGTCT GGCTGGACGG TACCGAAATC
ACCGCCCTGT CGCGCCGGCA GATGCGCCAG TTCCGCCGCA ATGCGCAGAT GGTGTTCCAG
GACCCCTATG GCTCGCTGTC GCCGCGCCGG ACGATCGCGC AGATCATCGC CGAGCCCATG
GATGTCTTCG GCACCGTCAC GGGCAAGCGC GACCGCCGCG AGAAGGTCGC AGAGCTCTTG
CGCCAGGTCG GCTTGCCGAC ATCCGTGATG GATCGCAATC CGCGGCAATT CTCGGGCGGG
CAGCGCCAGC GGATCTGCAT CGCCCGCGCC ATCTCGGTCT CGCCGCGCTT CATCGTGGCG
GATGAGCCGG TCTCGGCGCT GGATGTGTCG ATCCAGGCGC AGATCATCAA CCTGATGCAG
GATCTGCAGG CCGAAAAGGG CTTTGCCTCG CTGTTCATCG CCCATGACCT GGCCGTGGTA
CGCCACATCG CCGACCGCGT GGCGGTGATG TATCTGGGGC GCATCGTCGA AATCGGCCCG
AAAGAACAGA TCTACGAGGC CCCGCAGCAC CCATATACGC AGGCGCTGCT GTCCGCCGCA
CCCGAAATCG GCCGGGTCAA GCGCCGCAAG CGGCTGATCC TGGGCGGAGA TGTGCCCAGC
CCGACGAATA TCCCTCCGGG GTGCAGCTTT CACACGCGAT GTCCCATCGC GCAGGAACGC
TGCCGACGGG AAAGGCCCGC ACTTGCCGCC GTCGCCGGCG AACAGCGCGC GGCGTGTCAC
TTTGCCAGGC CGTTTCCGAT AACGATAAAG GCCACCGAAA CGCTTTCGTC CTAG
|
|---|
| Protein sequence | MTADILRVEG LGKTFEGGGG LLGGKRAAVR AVDGIDLTMK AGETLAVVGE SGCGKSTLGR
LLLRLIEPSE GRVWLDGTEI TALSRRQMRQ FRRNAQMVFQ DPYGSLSPRR TIAQIIAEPM
DVFGTVTGKR DRREKVAELL RQVGLPTSVM DRNPRQFSGG QRQRICIARA ISVSPRFIVA
DEPVSALDVS IQAQIINLMQ DLQAEKGFAS LFIAHDLAVV RHIADRVAVM YLGRIVEIGP
KEQIYEAPQH PYTQALLSAA PEIGRVKRRK RLILGGDVPS PTNIPPGCSF HTRCPIAQER
CRRERPALAA VAGEQRAACH FARPFPITIK ATETLSS
|
|---|
| |