| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_0196 |
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| Symbol | |
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| ID | 4578834 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | + |
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| Start bp | 178909 |
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| End bp | 179730 |
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| Gene Length | 822 bp |
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| Protein Length | 273 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639767513 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_914008 |
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| Protein GI | 119382952 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.292894 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACATCA CCGCTGAAAC TGTCCCCGCC GCGCTGAAGG GCGGCCCCCG TTACCTCGAT
GGCAAGGTCT GCGTGATCGT CGGCGTCGCC TCGCTGCGCG GCATCGGCTA TGCCACGGCG
GAACTGTTCG CCCGGCACGG CGCCAAGCTG GTCGTCGTCG ATCTGATGAT GGACGACACC
ATCGCCGCCG ATGTCAGCCA GGCCATCGCC ACCCGCAACG GCGAGGCGCC CGAACTCTTG
GGCCTGCGCT GCGACATCGG CCGCGCCGCC GATTGCCAGG GCGTGATCGA CCAGGCCGTG
GCGCGCTTCG GCCGGATCGA TTGCCTTGTG AACACCGCCG CCATCGTCAA GTCCGACGGG
CTGCTGGCGA TCTCGGGCGA CGATCTGGAC CTGATCCTGA ACGTCAACCT CAAGGGTGCC
TTCAACCTGT GCCAGAACGC GCTGCGCGTC TTCGAAGAAC AGGGCAGCGG CACGATCGTC
AACATCGCCT CGGTCGCCGC GCAGCGCGGC GGCGGGCTGG TGGGCGGCGC GCATTACGCG
GCCTCGAAAG GCGGCGTCAT CAGCCTGACG CGCAGCATCG CGCGCGAATT CGGCCCCAAG
GGCATCCGGG CGAACGCGAT CTGTCCCTCG ATGACCGAAA CCGGGATGCT GGACGGCAAT
GTGACCGAGG CGCAATTCGC CCAGATCGTC GATGCCATCC CGCTGAAACG CGCCGGCCGG
CCCGAGGATA TTGCCAATGC CTGCCTGTAT CTGGCATCCG ATCTTTCGGC CTATGTCACC
GGCACCACGC TGGACGTGAA TGGCGGCAGC CATATCCACT GA
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| Protein sequence | MNITAETVPA ALKGGPRYLD GKVCVIVGVA SLRGIGYATA ELFARHGAKL VVVDLMMDDT
IAADVSQAIA TRNGEAPELL GLRCDIGRAA DCQGVIDQAV ARFGRIDCLV NTAAIVKSDG
LLAISGDDLD LILNVNLKGA FNLCQNALRV FEEQGSGTIV NIASVAAQRG GGLVGGAHYA
ASKGGVISLT RSIAREFGPK GIRANAICPS MTETGMLDGN VTEAQFAQIV DAIPLKRAGR
PEDIANACLY LASDLSAYVT GTTLDVNGGS HIH
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