| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_0156 |
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| Symbol | |
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| ID | 4580180 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | - |
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| Start bp | 139135 |
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| End bp | 140139 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639767474 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_913969 |
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| Protein GI | 119382913 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4962] Flp pilus assembly protein, ATPase CpaF |
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| TIGRFAM ID | [TIGR02782] P-type conjugative transfer ATPase TrbB |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGGTT CGGACCACAT CGAGGCAATG GTGGAGCGCG GCGCCCGCAT GCTCCGCACC
GCGCTGGGGC CTGCTATCTC CGCCCTCTTG CGGGATCCGG GCATCGTCGA GGTGATGCTG
AACCCGGACG GTAGAATCTG GATCGACCGG CTGCGCGACG GGCTGGCGGA AACCGGCCAG
GTCCTGTCCC CAGCCGATGG CGAGCGCATC ATCCGGCTGG TGGCGCATCA TGTCGGTGTG
GAGGTCCATG CCCGGTCCCC GCGCGTCTCC GCCGAACTGC CCGAGACCGG CGAGCGCTTC
GAGGGGCTGC TGCCGCCGGT GGTCGTCGCC CCGGCCTTCG CCATCCGCAA GCCTGCCGTC
GCGGTGTTCA CTTTGGACGA TTACGTCGCC GCCGGGATCA TGACACGGAT GCAGGCCGAG
GCACTGCGGC TCGGTGTCGC CACCCGCGCC AACATCCTCG TCGCCGGCGG CACCTCCACC
GGCAAGACCA CGCTGACCAA TGCGCTGCTG GCCGAGGTGG CGAAGACGCA GGACCGGGTC
GTCGTCATCG AGGACACCCG CGAGCTGCAA TGCGCGGCGC CGAACCTCGT CGCCATGCGC
ACCAAGGACG GCGTCGCCAC CCTGTCCGAT CTGGTGCGTT CCTCGCTGCG CCTGCGCCCC
GACCGCATCC CGATCGGCGA GGTGCGCGGC GCCGAGGCGC TGGATCTGCT GAAGGCCTGG
GGTACCGGCC ATCCAGGCGG CATCGGCACG ATCCATGCCG GATCGGGGAT CGGGGCGCTG
CGCCGCCTCG AACAGCTGAT CCAGGAAGCC GTGATCACCG TGCCCCGTGC CCTGATCGCC
GAGACCGTCG ATCTCGTCGC GGTGTTGTCC GGACGCGGCA GCAATCGCCA CCTCACCGAA
CTCGTCCGAA TCAACGGGCT CGGTCCGGAC GGCGACTACC GCATCGCCCC GGTCATTCCC
GACACCGACA CGCACATTGC AGAAAATACT GGAGAACCCG AATGA
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| Protein sequence | MAGSDHIEAM VERGARMLRT ALGPAISALL RDPGIVEVML NPDGRIWIDR LRDGLAETGQ
VLSPADGERI IRLVAHHVGV EVHARSPRVS AELPETGERF EGLLPPVVVA PAFAIRKPAV
AVFTLDDYVA AGIMTRMQAE ALRLGVATRA NILVAGGTST GKTTLTNALL AEVAKTQDRV
VVIEDTRELQ CAAPNLVAMR TKDGVATLSD LVRSSLRLRP DRIPIGEVRG AEALDLLKAW
GTGHPGGIGT IHAGSGIGAL RRLEQLIQEA VITVPRALIA ETVDLVAVLS GRGSNRHLTE
LVRINGLGPD GDYRIAPVIP DTDTHIAENT GEPE
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